Literature DB >> 27771851

In-Vitro Refolding and Characterization of Recombinant Laccase (CotA) From Bacillus pumilus MK001 and Its Potential for Phenolics Degradation.

Sandeep Kumar1, Kavish Kr Jain1, Shikha Rani2, Kailash N Bhardwaj3, Manisha Goel2, Ramesh Chander Kuhad4,5.   

Abstract

Among lignocellulolytic enzymes, laccases are the most versatile, broadly specific, and largely studied enzyme with a wide range of biotechnological potential. Putative laccase (CotA) from Bacillus pumilus MK001 was cloned and expressed in E. coli. In addition to soluble bioactive fraction, inactive inclusion body fraction was also harvested and refolded under optimized conditions resulting in 64 % of refolding efficiency. The enzyme was found to be thermostable exhibiting a half-life of 60 min at 80 °C. UV thermal CD spectra also supported the observation as about 9 % increase in β-sheets was recorded after thermal induction. The 3D CotA structure was constructed through homology modeling and the best selected model was verified through PROCHECK, ERRAT, Verify 3D, and PROSA servers. Final 3D model showed potential binding affinities with ferulic acid, caffeic acid, and vanillin. Results of the docking studies were further validated by HPLC analysis which signified the efficient bioconversion ability of CotA.

Entities:  

Keywords:  Bacterial laccase; Docking; Modeling; Phenolics degradation; Refolding

Mesh:

Substances:

Year:  2016        PMID: 27771851     DOI: 10.1007/s12033-016-9978-2

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  32 in total

1.  Detection of unrelated proteins in sequences multiple alignments by using predicted secondary structures.

Authors:  Mounir Errami; Christophe Geourjon; Gilbert Deléage
Journal:  Bioinformatics       Date:  2003-03-01       Impact factor: 6.937

2.  ZINC--a free database of commercially available compounds for virtual screening.

Authors:  John J Irwin; Brian K Shoichet
Journal:  J Chem Inf Model       Date:  2005 Jan-Feb       Impact factor: 4.956

3.  Oxidation of ferulic acid by laccase: identification of the products and inhibitory effects of some dipeptides.

Authors:  F Carunchio; C Crescenzi; A M Girelli; A Messina; A M Tarola
Journal:  Talanta       Date:  2001-08-03       Impact factor: 6.057

Review 4.  Laccase engineering: from rational design to directed evolution.

Authors:  Diana M Mate; Miguel Alcalde
Journal:  Biotechnol Adv       Date:  2014-12-27       Impact factor: 14.227

5.  Structural and functional characterization of two-domain laccase from Streptomyces viridochromogenes.

Authors:  L I Trubitsina; S V Tishchenko; A G Gabdulkhakov; A V Lisov; M V Zakharova; A A Leontievsky
Journal:  Biochimie       Date:  2015-03-13       Impact factor: 4.079

6.  Laccase: enzyme revisited and function redefined.

Authors:  Krishna Kant Sharma; Ramesh Chander Kuhad
Journal:  Indian J Microbiol       Date:  2008-06-18       Impact factor: 2.461

7.  Increasing the thermostability of D-xylose isomerase by introduction of a proline into the turn of a random coil.

Authors:  G P Zhu; C Xu; M K Teng; L M Tao; X Y Zhu; C J Wu; J Hang; L W Niu; Y Z Wang
Journal:  Protein Eng       Date:  1999-08

8.  AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.

Authors:  Garrett M Morris; Ruth Huey; William Lindstrom; Michel F Sanner; Richard K Belew; David S Goodsell; Arthur J Olson
Journal:  J Comput Chem       Date:  2009-12       Impact factor: 3.376

9.  Kinetics of inclusion body formation and its correlation with the characteristics of protein aggregates in Escherichia coli.

Authors:  Arun K Upadhyay; Aruna Murmu; Anupam Singh; Amulya K Panda
Journal:  PLoS One       Date:  2012-03-29       Impact factor: 3.240

10.  Crystal structure of a blue laccase from Lentinus tigrinus: evidences for intermediates in the molecular oxygen reductive splitting by multicopper oxidases.

Authors:  Marta Ferraroni; Nina M Myasoedova; Vadim Schmatchenko; Alexey A Leontievsky; Ludmila A Golovleva; Andrea Scozzafava; Fabrizio Briganti
Journal:  BMC Struct Biol       Date:  2007-09-26
View more
  4 in total

1.  Functional Expression of a Thermostable Endoglucanase from Thermoascus aurantiacus RCKK in Pichia pastoris X-33 and Its Characterization.

Authors:  Kavish Kumar Jain; Sandeep Kumar; Kailash N Bhardwaj; Ramesh Chander Kuhad
Journal:  Mol Biotechnol       Date:  2018-10       Impact factor: 2.695

Review 2.  Bacterial laccases: promising biological green tools for industrial applications.

Authors:  Zheng-Bing Guan; Quan Luo; Hao-Ran Wang; Yu Chen; Xiang-Ru Liao
Journal:  Cell Mol Life Sci       Date:  2018-07-25       Impact factor: 9.261

3.  Manganese Stress Adaptation Mechanisms of Bacillus safensis Strain ST7 From Mine Soil.

Authors:  Xueqin Ran; Zhongmei Zhu; Hong Long; Qun Tian; Longjiang You; Xingdiao Wu; Qin Liu; Shihui Huang; Sheng Li; Xi Niu; Jiafu Wang
Journal:  Front Microbiol       Date:  2021-11-25       Impact factor: 5.640

4.  Degradation of Aflatoxin B1 and Zearalenone by Bacterial and Fungal Laccases in Presence of Structurally Defined Chemicals and Complex Natural Mediators.

Authors:  Xiaolu Wang; Yingguo Bai; Huoqing Huang; Tao Tu; Yuan Wang; Yaru Wang; Huiying Luo; Bin Yao; Xiaoyun Su
Journal:  Toxins (Basel)       Date:  2019-10-22       Impact factor: 4.546

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.