Literature DB >> 27770241

The complete mitochondrial genome of Trabala vishnou guttata (Lepidoptera: Lasiocampidae) and the related phylogenetic analyses.

Liuyu Wu1, Xiao Xiong1, Xuming Wang2, Tianrong Xin1, Jing Wang1, Zhiwen Zou1, Bin Xia3.   

Abstract

The bluish yellow lappet moth, Trabala vishnou guttata is an extraordinarily important pest in China. The complete mitochondrial genome is sequenced and determined firstly, which is based on traditional PCR amplification and primer walking methods with a length of 15,281 bp, including 13 protein-coding (PCG) genes, 22 transfer RNA (rRNA) genes, two ribosomal RNA (tRNA) genes, and an A + T-rich region. The gene order and orientation of the T. vishnou guttata mitogenome were identical to the other sequenced Lasiocampidae species. The overall nucleotide composition of T. vishnou guttata is A (40.27 %), T (40.59 %), C (11.58 %) and G (7.56 %), respectively. All the PCGs initiate with the three orthodox start codons ATN except for coxI with CGA start codon. Three PCGs (coxI, coxII and nad4) used incomplete stop codon T, while the other 10 PCGs terminate with complete stop codon TAA. All tRNA genes have a typical clover-leaf structure except for the absence of a dihydrouridine arm in trnS (AGN). The length of A + T-rich region is 383 bp. Phylogeny is established to reveal the genetic relationship between T. vishnou guttata and other lepidopteran species based on 13 PCGs nucleotide sequences of the sequenced species (32 taxa) by Maximum likelihood and Bayesian methods. Phylogenetic analyses presents that T. vishnou guttata and its closely related species (Dendrolimus taxa) are clustered on Lasiocampidae group. It is a sister clade relationship between Lasiocampidae and other families in Bombycoidea with a bootstrap value of 83 % and a posterior probability of 0.75. This study supports that Lasiocampidae may be independent from Bombycoidea.

Entities:  

Keywords:  Lasiocampidae; Mitochondrial genome; Phylogenetic analyses; Trabala vishnou guttata

Mesh:

Substances:

Year:  2016        PMID: 27770241     DOI: 10.1007/s10709-016-9934-x

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  49 in total

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3.  MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.

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Journal:  Mol Biol Evol       Date:  2011-05-04       Impact factor: 16.240

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Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2015-09-22       Impact factor: 1.514

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Journal:  Mitochondrial DNA       Date:  2013-04-16

Review 7.  The genetics and genomics of the silkworm, Bombyx mori.

Authors:  Marian R Goldsmith; Toru Shimada; Hiroaki Abe
Journal:  Annu Rev Entomol       Date:  2005       Impact factor: 19.686

Review 8.  [Review of mtDNA in molecular evolution studies].

Authors:  Xing Chen; Yong-Yi Shen; Ya-Ping Zhang
Journal:  Dongwuxue Yanjiu       Date:  2012-12

9.  The complete mitochondrial genomes of two ghost moths, Thitarodes renzhiensis and Thitarodes yunnanensis: the ancestral gene arrangement in Lepidoptera.

Authors:  Yong-Qiang Cao; Chuan Ma; Ji-Yue Chen; Da-Rong Yang
Journal:  BMC Genomics       Date:  2012-06-22       Impact factor: 3.969

10.  The Complete Mitochondrial Genome of Brachmia macroscopa (Lepidoptera: Gelechiidae) and Its Related Phylogenetic Analysis.

Authors:  Li Ma; Wan-Wei Dong; Guo-Fang Jiang; Xing Wang
Journal:  J Insect Sci       Date:  2016-01-25       Impact factor: 1.857

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  1 in total

1.  Mitochondrial phylogeny and comparative mitogenomics of closely related pine moth pests (Lepidoptera: Dendrolimus).

Authors:  Jie Qin; Jing Li; Qiang Gao; John-James Wilson; Ai-Bing Zhang
Journal:  PeerJ       Date:  2019-07-23       Impact factor: 2.984

  1 in total

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