Literature DB >> 27766616

Genomics of primary chemoresistance and remission induction failure in paediatric and adult acute myeloid leukaemia.

Fiona C Brown1, Paolo Cifani1, Esther Drill2, Jie He3, Eric Still1, Shan Zhong3, Sohail Balasubramanian3, Dean Pavlick3, Bahar Yilmazel3, Kristina M Knapp4, Todd A Alonzo5,6, Soheil Meshinchi5,7, Richard M Stone8, Steven M Kornblau9, Guido Marcucci10, Alan S Gamis5,11, John C Byrd12, Mithat Gonen2, Ross L Levine13, Alex Kentsis1,14.   

Abstract

Cure rates of children and adults with acute myeloid leukaemia (AML) remain unsatisfactory partly due to chemotherapy resistance. We investigated the genetic basis of AML in 107 primary cases by sequencing 670 genes mutated in haematological malignancies. SETBP1, ASXL1 and RELN mutations were significantly associated with primary chemoresistance. We identified genomic alterations not previously described in AML, together with distinct genes that were significantly overexpressed in therapy-resistant AML. Defined gene mutations were sufficient to explain primary induction failure in only a minority of cases. Thus, additional genetic or molecular mechanisms must cause primary chemoresistance in paediatric and adult AML.
© 2016 John Wiley & Sons Ltd.

Entities:  

Keywords:  cytogenetically normal acute myeloid leukaemia; induction failure; paediatric leukaemia; primary chemoresistance; targeted deep sequencing genomics

Mesh:

Substances:

Year:  2016        PMID: 27766616      PMCID: PMC5177472          DOI: 10.1111/bjh.14413

Source DB:  PubMed          Journal:  Br J Haematol        ISSN: 0007-1048            Impact factor:   6.998


  15 in total

1.  SQSTM1-NUP214: a new gene fusion in adult T-cell acute lymphoblastic leukemia.

Authors:  Paolo Gorello; Roberta La Starza; Danika Di Giacomo; Monica Messina; Maria Cristina Puzzolo; Barbara Crescenzi; Alessandra Santoro; Sabina Chiaretti; Cristina Mecucci
Journal:  Haematologica       Date:  2010-09-17       Impact factor: 9.941

2.  NUP98/NSD1 characterizes a novel poor prognostic group in acute myeloid leukemia with a distinct HOX gene expression pattern.

Authors:  Iris H I M Hollink; Marry M van den Heuvel-Eibrink; Susan T C J M Arentsen-Peters; Marta Pratcorona; Saman Abbas; Jenny E Kuipers; Janneke F van Galen; H Berna Beverloo; Edwin Sonneveld; Gert-Jan J L Kaspers; Jan Trka; Andre Baruchel; Martin Zimmermann; Ursula Creutzig; Dirk Reinhardt; Rob Pieters; Peter J M Valk; C Michel Zwaan
Journal:  Blood       Date:  2011-08-02       Impact factor: 22.113

3.  Integrated genomic DNA/RNA profiling of hematologic malignancies in the clinical setting.

Authors:  Jie He; Omar Abdel-Wahab; Michelle K Nahas; Kai Wang; Raajit K Rampal; Andrew M Intlekofer; Jay Patel; Andrei Krivstov; Garrett M Frampton; Lauren E Young; Shan Zhong; Mark Bailey; Jared R White; Steven Roels; Jason Deffenbaugh; Alex Fichtenholtz; Timothy Brennan; Mark Rosenzweig; Kimberly Pelak; Kristina M Knapp; Kristina W Brennan; Amy L Donahue; Geneva Young; Lazaro Garcia; Selmira T Beckstrom; Mandy Zhao; Emily White; Vera Banning; Jamie Buell; Kiel Iwanik; Jeffrey S Ross; Deborah Morosini; Anas Younes; Alan M Hanash; Elisabeth Paietta; Kathryn Roberts; Charles Mullighan; Ahmet Dogan; Scott A Armstrong; Tariq Mughal; Jo-Anne Vergilio; Elaine Labrecque; Rachel Erlich; Christine Vietz; Roman Yelensky; Philip J Stephens; Vincent A Miller; Marcel R M van den Brink; Geoff A Otto; Doron Lipson; Ross L Levine
Journal:  Blood       Date:  2016-03-10       Impact factor: 22.113

4.  Inositol polyphosphate 4-phosphatase II (INPP4B) is associated with chemoresistance and poor outcome in AML.

Authors:  Sewa Rijal; Shaun Fleming; Nik Cummings; Natalie K Rynkiewicz; Lisa M Ooms; Nhu-Y N Nguyen; Tse-Chieh Teh; Sharon Avery; Julie F McManus; Anthony T Papenfuss; Catriona McLean; Mark A Guthridge; Christina A Mitchell; Andrew H Wei
Journal:  Blood       Date:  2015-03-03       Impact factor: 22.113

5.  The genetic basis of early T-cell precursor acute lymphoblastic leukaemia.

Authors:  Jinghui Zhang; Li Ding; Linda Holmfeldt; Gang Wu; Sue L Heatley; Debbie Payne-Turner; John Easton; Xiang Chen; Jianmin Wang; Michael Rusch; Charles Lu; Shann-Ching Chen; Lei Wei; J Racquel Collins-Underwood; Jing Ma; Kathryn G Roberts; Stanley B Pounds; Anatoly Ulyanov; Jared Becksfort; Pankaj Gupta; Robert Huether; Richard W Kriwacki; Matthew Parker; Daniel J McGoldrick; David Zhao; Daniel Alford; Stephen Espy; Kiran Chand Bobba; Guangchun Song; Deqing Pei; Cheng Cheng; Stefan Roberts; Michael I Barbato; Dario Campana; Elaine Coustan-Smith; Sheila A Shurtleff; Susana C Raimondi; Maria Kleppe; Jan Cools; Kristin A Shimano; Michelle L Hermiston; Sergei Doulatov; Kolja Eppert; Elisa Laurenti; Faiyaz Notta; John E Dick; Giuseppe Basso; Stephen P Hunger; Mignon L Loh; Meenakshi Devidas; Brent Wood; Stuart Winter; Kimberley P Dunsmore; Robert S Fulton; Lucinda L Fulton; Xin Hong; Christopher C Harris; David J Dooling; Kerri Ochoa; Kimberly J Johnson; John C Obenauer; William E Evans; Ching-Hon Pui; Clayton W Naeve; Timothy J Ley; Elaine R Mardis; Richard K Wilson; James R Downing; Charles G Mullighan
Journal:  Nature       Date:  2012-01-11       Impact factor: 49.962

6.  Prognostic index for adult patients with acute myeloid leukemia in first relapse.

Authors:  Dimitri A Breems; Wim L J Van Putten; Peter C Huijgens; Gert J Ossenkoppele; Gregor E G Verhoef; Leo F Verdonck; Edo Vellenga; Georgine E De Greef; Emanuel Jacky; Johannes Van der Lelie; Marc A Boogaerts; Bob Löwenberg
Journal:  J Clin Oncol       Date:  2005-01-04       Impact factor: 44.544

7.  Association Between Mutation Clearance After Induction Therapy and Outcomes in Acute Myeloid Leukemia.

Authors:  Jeffery M Klco; Christopher A Miller; Malachi Griffith; Allegra Petti; David H Spencer; Shamika Ketkar-Kulkarni; Lukas D Wartman; Matthew Christopher; Tamara L Lamprecht; Nicole M Helton; Eric J Duncavage; Jacqueline E Payton; Jack Baty; Sharon E Heath; Obi L Griffith; Dong Shen; Jasreet Hundal; Gue Su Chang; Robert Fulton; Michelle O'Laughlin; Catrina Fronick; Vincent Magrini; Ryan T Demeter; David E Larson; Shashikant Kulkarni; Bradley A Ozenberger; John S Welch; Matthew J Walter; Timothy A Graubert; Peter Westervelt; Jerald P Radich; Daniel C Link; Elaine R Mardis; John F DiPersio; Richard K Wilson; Timothy J Ley
Journal:  JAMA       Date:  2015-08-25       Impact factor: 56.272

8.  Genomic Profiling of Pediatric Acute Myeloid Leukemia Reveals a Changing Mutational Landscape from Disease Diagnosis to Relapse.

Authors:  Jason E Farrar; Heather L Schuback; Rhonda E Ries; Daniel Wai; Oliver A Hampton; Lisa R Trevino; Todd A Alonzo; Jaime M Guidry Auvil; Tanja M Davidsen; Patee Gesuwan; Leandro Hermida; Donna M Muzny; Ninad Dewal; Navin Rustagi; Lora R Lewis; Alan S Gamis; David A Wheeler; Malcolm A Smith; Daniela S Gerhard; Soheil Meshinchi
Journal:  Cancer Res       Date:  2016-03-03       Impact factor: 12.701

9.  Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing.

Authors:  Li Ding; Timothy J Ley; David E Larson; Christopher A Miller; Daniel C Koboldt; John S Welch; Julie K Ritchey; Margaret A Young; Tamara Lamprecht; Michael D McLellan; Joshua F McMichael; John W Wallis; Charles Lu; Dong Shen; Christopher C Harris; David J Dooling; Robert S Fulton; Lucinda L Fulton; Ken Chen; Heather Schmidt; Joelle Kalicki-Veizer; Vincent J Magrini; Lisa Cook; Sean D McGrath; Tammi L Vickery; Michael C Wendl; Sharon Heath; Mark A Watson; Daniel C Link; Michael H Tomasson; William D Shannon; Jacqueline E Payton; Shashikant Kulkarni; Peter Westervelt; Matthew J Walter; Timothy A Graubert; Elaine R Mardis; Richard K Wilson; John F DiPersio
Journal:  Nature       Date:  2012-01-11       Impact factor: 49.962

Review 10.  Pediatric AML: From Biology to Clinical Management.

Authors:  Jasmijn D E de Rooij; C Michel Zwaan; Marry van den Heuvel-Eibrink
Journal:  J Clin Med       Date:  2015-01-09       Impact factor: 4.241

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  17 in total

1.  Only SETBP1 hotspot mutations are associated with refractory disease in myeloid malignancies.

Authors:  Nils Winkelmann; Vivien Schäfer; Jenny Rinke; Alexander Kaiser; Philipp Ernst; Sebastian Scholl; Andreas Hochhaus; Thomas Ernst
Journal:  J Cancer Res Clin Oncol       Date:  2017-09-14       Impact factor: 4.553

2.  MEF2C Phosphorylation Is Required for Chemotherapy Resistance in Acute Myeloid Leukemia.

Authors:  Fiona C Brown; Eric Still; Richard P Koche; Christina Y Yim; Sumiko Takao; Paolo Cifani; Casie Reed; Shehana Gunasekera; Scott B Ficarro; Peter Romanienko; Willie Mark; Craig McCarthy; Elisa de Stanchina; Mithat Gonen; Venkatraman Seshan; Patrick Bhola; Conor O'Donnell; Barbara Spitzer; Crystal Stutzke; Vincent-Philippe Lavallée; Josée Hébert; Andrei V Krivtsov; Ari Melnick; Elisabeth M Paietta; Martin S Tallman; Anthony Letai; Guy Sauvageau; Gayle Pouliot; Ross Levine; Jarrod A Marto; Scott A Armstrong; Alex Kentsis
Journal:  Cancer Discov       Date:  2018-02-05       Impact factor: 39.397

3.  NUP-98 Rearrangements Led to the Identification of Candidate Biomarkers for Primary Induction Failure in Pediatric Acute Myeloid Leukemia.

Authors:  Vincenza Barresi; Virginia Di Bella; Nellina Andriano; Anna Provvidenza Privitera; Paola Bonaccorso; Manuela La Rosa; Valeria Iachelli; Giorgia Spampinato; Giulio Pulvirenti; Chiara Scuderi; Daniele F Condorelli; Luca Lo Nigro
Journal:  Int J Mol Sci       Date:  2021-04-27       Impact factor: 5.923

4.  Whole exome sequencing identifies novel mutations of epigenetic regulators in chemorefractory pediatric acute myeloid leukemia.

Authors:  Di Zhan; Yingchi Zhang; Peifang Xiao; Xinchang Zheng; Min Ruan; Jingliao Zhang; Aili Chen; Yao Zou; Yumei Chen; Gang Huang; Shaoyan Hu; Qian-Fei Wang; Xiaofan Zhu
Journal:  Leuk Res       Date:  2017-12-08       Impact factor: 3.715

Review 5.  The Role of Tumor Microenvironment in Chemoresistance: To Survive, Keep Your Enemies Closer.

Authors:  Dimakatso Alice Senthebane; Arielle Rowe; Nicholas Ekow Thomford; Hendrina Shipanga; Daniella Munro; Mohammad A M Al Mazeedi; Hashim A M Almazyadi; Karlien Kallmeyer; Collet Dandara; Michael S Pepper; M Iqbal Parker; Kevin Dzobo
Journal:  Int J Mol Sci       Date:  2017-07-21       Impact factor: 5.923

6.  Upregulation of miR-142-3p Improves Drug Sensitivity of Acute Myelogenous Leukemia through Reducing P-Glycoprotein and Repressing Autophagy by Targeting HMGB1.

Authors:  Yuan Zhang; Yufeng Liu; Xueju Xu
Journal:  Transl Oncol       Date:  2017-04-23       Impact factor: 4.243

Review 7.  Molecular and genetic alterations associated with therapy resistance and relapse of acute myeloid leukemia.

Authors:  Hubert Hackl; Ksenia Astanina; Rotraud Wieser
Journal:  J Hematol Oncol       Date:  2017-02-20       Impact factor: 17.388

8.  A JAK/STAT-mediated inflammatory signaling cascade drives oncogenesis in AF10-rearranged AML.

Authors:  Bo-Rui Chen; Anagha Deshpande; Karina Barbosa; Maria Kleppe; Xue Lei; Narayana Yeddula; Pablo Sánchez Vela; Alexandre Rosa Campos; Robert J Wechsler-Reya; Anindya Bagchi; Soheil Meshinchi; Connie Eaves; Irmela Jeremias; Torsten Haferlach; David A Frank; Ze'ev Ronai; Sumit Chanda; Scott A Armstrong; Peter D Adams; Ross L Levine; Aniruddha J Deshpande
Journal:  Blood       Date:  2021-06-17       Impact factor: 25.476

Review 9.  SETBP1 dysregulation in congenital disorders and myeloid neoplasms.

Authors:  Nicoletta Coccaro; Giuseppina Tota; Antonella Zagaria; Luisa Anelli; Giorgina Specchia; Francesco Albano
Journal:  Oncotarget       Date:  2017-04-19

10.  Distinct age-associated molecular profiles in acute myeloid leukemia defined by comprehensive clinical genomic profiling.

Authors:  Katherine Tarlock; Shan Zhong; Yuting He; Rhonda Ries; Eric Severson; Mark Bailey; Samantha Morley; Sohail Balasubramanian; Rachel Erlich; Doron Lipson; Geoff A Otto; Jo-Anne Vergillo; E Anders Kolb; Jeffrey S Ross; Tariq Mughal; Philip J Stephens; Vincent Miller; Soheil Meshinchi; Jie He
Journal:  Oncotarget       Date:  2018-05-29
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