Literature DB >> 27759155

Chaperone-mediated chromatin assembly and transcriptional regulation in Xenopus laevis.

Takashi Onikubo1, David Shechter.   

Abstract

Chromatin is the complex of DNA and histone proteins that is the physiological form of the eukaryotic genome. Chromatin is generally repressive for transcription, especially so during early metazoan development when maternal factors are explicitly in control of new zygotic gene expression. In the important model organism Xenopus laevis, maturing oocytes are transcriptionally active with reduced rates of chromatin assembly, while laid eggs and fertilized embryos have robust rates of chromatin assembly and are transcriptionally repressed. As the DNA-to-cytoplasmic ratio decreases approaching the mid-blastula transition (MBT) and the onset of zygotic genome activation (ZGA), the chromatin assembly process changes with the concomitant reduction in maternal chromatin components. Chromatin assembly is mediated in part by histone chaperones that store maternal histones and release them into new zygotic chromatin. Here, we review literature on chromatin and transcription in frog embryos and cell-free extracts and highlight key insights demonstrating the roles of maternal and zygotic histone deposition and their relationship with transcriptional regulation. We explore the central historical and recent literature on the use of Xenopus embryos and the key contributions provided by experiments in cell-free oocyte and egg extracts for the interplay between histone chaperones, chromatin assembly, and transcriptional regulation. Ongoing and future studies in Xenopus cell free extracts will likely contribute essential new insights into the interplay between chromatin assembly and transcriptional regulation.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27759155      PMCID: PMC5087778          DOI: 10.1387/ijdb.130188ds

Source DB:  PubMed          Journal:  Int J Dev Biol        ISSN: 0214-6282            Impact factor:   2.203


  77 in total

1.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

2.  Reconstitution of mitotic chromatids with a minimum set of purified factors.

Authors:  Keishi Shintomi; Tatsuro S Takahashi; Tatsuya Hirano
Journal:  Nat Cell Biol       Date:  2015-06-15       Impact factor: 28.824

3.  Replication-coupled chromatin assembly is required for the repression of basal transcription in vivo.

Authors:  G Almouzni; A P Wolffe
Journal:  Genes Dev       Date:  1993-10       Impact factor: 11.361

Review 4.  Nuclear assembly, structure, and function: the use of Xenopus in vitro systems.

Authors:  G Almouzni; A P Wolffe
Journal:  Exp Cell Res       Date:  1993-03       Impact factor: 3.905

5.  Assembly of nucleosomes: the reaction involving X. laevis nucleoplasmin.

Authors:  W C Earnshaw; B M Honda; R A Laskey; J O Thomas
Journal:  Cell       Date:  1980-09       Impact factor: 41.582

6.  A distinct H2A.X isoform is enriched in Xenopus laevis eggs and early embryos and is phosphorylated in the absence of a checkpoint.

Authors:  David Shechter; Raghu K Chitta; Andrew Xiao; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-08       Impact factor: 11.205

7.  Assembly of SV40 chromatin in a cell-free system from Xenopus eggs.

Authors:  R A Laskey; A D Mills; N R Morris
Journal:  Cell       Date:  1977-02       Impact factor: 41.582

8.  Remodeling of sperm chromatin induced in egg extracts of amphibians.

Authors:  C Katagiri; K Ohsumi
Journal:  Int J Dev Biol       Date:  1994-06       Impact factor: 2.203

9.  Remodeling sperm chromatin in Xenopus laevis egg extracts: the role of core histone phosphorylation and linker histone B4 in chromatin assembly.

Authors:  S Dimitrov; M C Dasso; A P Wolffe
Journal:  J Cell Biol       Date:  1994-08       Impact factor: 10.539

10.  Glutamylation of Nap1 modulates histone H1 dynamics and chromosome condensation in Xenopus.

Authors:  Kelly E Miller; Rebecca Heald
Journal:  J Cell Biol       Date:  2015-04-20       Impact factor: 10.539

View more
  2 in total

1.  Nucleoplasmin is a limiting component in the scaling of nuclear size with cytoplasmic volume.

Authors:  Pan Chen; Miroslav Tomschik; Katherine M Nelson; John Oakey; Jesse C Gatlin; Daniel L Levy
Journal:  J Cell Biol       Date:  2019-10-21       Impact factor: 10.539

Review 2.  Making Mitotic Chromosomes in a Test Tube.

Authors:  Keishi Shintomi
Journal:  Epigenomes       Date:  2022-07-20
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.