Literature DB >> 27757448

Feature driven classification of Raman spectra for real-time spectral brain tumour diagnosis using sound.

Ryan Stables1, Graeme Clemens2, Holly J Butler3, Katherine M Ashton4, Andrew Brodbelt4, Timothy P Dawson4, Leanne M Fullwood5, Michael D Jenkinson6, Matthew J Baker3.   

Abstract

Spectroscopic diagnostics have been shown to be an effective tool for the analysis and discrimination of disease states from human tissue. Furthermore, Raman spectroscopic probes are of particular interest as they allow for in vivo spectroscopic diagnostics, for tasks such as the identification of tumour margins during surgery. In this study, we investigate a feature-driven approach to the classification of metastatic brain cancer, glioblastoma (GB) and non-cancer from tissue samples, and we provide a real-time feedback method for endoscopic diagnostics using sound. To do this, we first evaluate the sensitivity and specificity of three classifiers (SVM, KNN and LDA), when trained with both sub-band spectral features and principal components taken directly from Raman spectra. We demonstrate that the feature extraction approach provides an increase in classification accuracy of 26.25% for SVM and 25% for KNN. We then discuss the molecular assignment of the most salient sub-bands in the dataset. The most salient sub-band features are mapped to parameters of a frequency modulation (FM) synthesizer in order to generate audio clips from each tissue sample. Based on the properties of the sub-band features, the synthesizer was able to maintain similar sound timbres within the disease classes and provide different timbres between disease classes. This was reinforced via listening tests, in which participants were able to discriminate between classes with mean classification accuracy of 71.1%. Providing intuitive feedback via sound frees the surgeons' visual attention to remain on the patient, allowing for greater control over diagnostic and surgical tools during surgery, and thus promoting clinical translation of spectroscopic diagnostics.

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Year:  2016        PMID: 27757448     DOI: 10.1039/c6an01583b

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  7 in total

1.  Rise of Raman spectroscopy in neurosurgery: a review.

Authors:  Damon DePaoli; Émile Lemoine; Katherine Ember; Martin Parent; Michel Prud'homme; Léo Cantin; Kevin Petrecca; Frédéric Leblond; Daniel C Côté
Journal:  J Biomed Opt       Date:  2020-05       Impact factor: 3.170

2.  Label-free Detection for a DNA Methylation Assay Using Raman Spectroscopy.

Authors:  Jeongho Kim; Hae Jeong Park; Jae Hyung Kim; Boksoon Chang; Hun-Kuk Park
Journal:  Chin Med J (Engl)       Date:  2017-08-20       Impact factor: 2.628

Review 3.  Raman Spectroscopy as a Neuromonitoring Tool in Traumatic Brain Injury: A Systematic Review and Clinical Perspectives.

Authors:  Andrew R Stevens; Clarissa A Stickland; Georgia Harris; Zubair Ahmed; Pola Goldberg Oppenheimer; Antonio Belli; David J Davies
Journal:  Cells       Date:  2022-04-05       Impact factor: 6.600

4.  Performance Improvement of NIR Spectral Pattern Recognition from Three Compensation Models' Voting and Multi-Modal Fusion.

Authors:  Niangen Ye; Sheng Zhong; Zile Fang; Haijun Gao; Zhihua Du; Heng Chen; Lu Yuan; Tao Pan
Journal:  Molecules       Date:  2022-07-13       Impact factor: 4.927

5.  Rural Acoustic Landscape Analysis Based on Segmentation and Extraction of Spectral Image Feature Information.

Authors:  Huijun Xiao; Tangsen Huang; Ensong Jiang
Journal:  Appl Bionics Biomech       Date:  2022-10-08       Impact factor: 1.664

Review 6.  The role of artificial intelligence in paediatric neuroradiology.

Authors:  Catherine Pringle; John-Paul Kilday; Ian Kamaly-Asl; Stavros Michael Stivaros
Journal:  Pediatr Radiol       Date:  2022-03-26

7.  Rapid Label-Free Analysis of Brain Tumor Biopsies by Near Infrared Raman and Fluorescence Spectroscopy-A Study of 209 Patients.

Authors:  Roberta Galli; Matthias Meinhardt; Edmund Koch; Gabriele Schackert; Gerald Steiner; Matthias Kirsch; Ortrud Uckermann
Journal:  Front Oncol       Date:  2019-11-05       Impact factor: 6.244

  7 in total

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