Literature DB >> 27753511

DNA barcodes for bio-surveillance: regulated and economically important arthropod plant pests.

Muhammad Ashfaq1,1, Paul D N Hebert1,1.   

Abstract

Many of the arthropod species that are important pests of agriculture and forestry are impossible to discriminate morphologically throughout all of their life stages. Some cannot be differentiated at any life stage. Over the past decade, DNA barcoding has gained increasing adoption as a tool to both identify known species and to reveal cryptic taxa. Although there has not been a focused effort to develop a barcode library for them, reference sequences are now available for 77% of the 409 species of arthropods documented on major pest databases. Aside from developing the reference library needed to guide specimen identifications, past barcode studies have revealed that a significant fraction of arthropod pests are a complex of allied taxa. Because of their importance as pests and disease vectors impacting global agriculture and forestry, DNA barcode results on these arthropods have significant implications for quarantine detection, regulation, and management. The current review discusses these implications in light of the presence of cryptic species in plant pests exposed by DNA barcoding.

Keywords:  cryptic taxa; espèces envahissantes; gestion des espèces nuisibles; identification d’espèces; invasive species; pest management; quarantaine; quarantine; species identification; taxons cryptiques

Mesh:

Year:  2016        PMID: 27753511     DOI: 10.1139/gen-2016-0024

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  18 in total

1.  Assessment of Psyllid Handling and DNA Extraction Methods in the Detection of 'Candidatus Liberibacter Solanacearum' by qPCR.

Authors:  María Quintana; Leandro de-León; Jaime Cubero; Felipe Siverio
Journal:  Microorganisms       Date:  2022-05-26

2.  Mapping global biodiversity connections with DNA barcodes: Lepidoptera of Pakistan.

Authors:  Muhammad Ashfaq; Saleem Akhtar; Muhammad Athar Rafi; Shahid Mansoor; Paul D N Hebert
Journal:  PLoS One       Date:  2017-03-24       Impact factor: 3.240

3.  Cryptic Plutella species show deep divergence despite the capacity to hybridize.

Authors:  Kym D Perry; Gregory J Baker; Kevin J Powis; Joanne K Kent; Christopher M Ward; Simon W Baxter
Journal:  BMC Evol Biol       Date:  2018-05-29       Impact factor: 3.260

Review 4.  Generating DNA sequence data with limited resources for molecular biology: Lessons from a barcoding project in Indonesia.

Authors:  Gillian H Dean; Rani Asmarayani; Marlina Ardiyani; Yessi Santika; Teguh Triono; Sarah Mathews; Campbell O Webb
Journal:  Appl Plant Sci       Date:  2018-07-13       Impact factor: 1.936

5.  Assembling a DNA barcode reference library for the spiders (Arachnida: Araneae) of Pakistan.

Authors:  Muhammad Ashfaq; Gergin Blagoev; Hafiz Muhammad Tahir; Arif M Khan; Muhammad Khalid Mukhtar; Saleem Akhtar; Abida Butt; Shahid Mansoor; Paul D N Hebert
Journal:  PLoS One       Date:  2019-05-22       Impact factor: 3.240

Review 6.  Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance.

Authors:  Alexander M Piper; Jana Batovska; Noel O I Cogan; John Weiss; John Paul Cunningham; Brendan C Rodoni; Mark J Blacket
Journal:  Gigascience       Date:  2019-08-01       Impact factor: 6.524

7.  Molecular evolution of cytochrome C oxidase-I protein of insects living in Saudi Arabia.

Authors:  Jamal S M Sabir; Samar Rabah; Haitham Yacoub; Nahid H Hajrah; Ahmed Atef; Mohammed Al-Matary; Sherif Edris; Mona G Alharbi; Magdah Ganash; Jazem Mahyoub; Rashad R Al-Hindi; Khalid M Al-Ghamdi; Neil Hall; Ahmed Bahieldin; Majid R Kamli; Irfan A Rather
Journal:  PLoS One       Date:  2019-11-04       Impact factor: 3.240

8.  The School Malaise Trap Program: Coupling educational outreach with scientific discovery.

Authors:  Dirk Steinke; Vanessa Breton; Emily Berzitis; Paul D N Hebert
Journal:  PLoS Biol       Date:  2017-04-24       Impact factor: 8.029

Review 9.  High-throughput identification and diagnostics of pathogens and pests: Overview and practical recommendations.

Authors:  Leho Tedersoo; Rein Drenkhan; Sten Anslan; Carmen Morales-Rodriguez; Michelle Cleary
Journal:  Mol Ecol Resour       Date:  2018-12-04       Impact factor: 7.090

10.  BIN overlap confirms transcontinental distribution of pest aphids (Hemiptera: Aphididae).

Authors:  Muhammad Tayyib Naseem; Muhammad Ashfaq; Arif Muhammad Khan; Akhtar Rasool; Muhammad Asif; Paul D N Hebert
Journal:  PLoS One       Date:  2019-12-10       Impact factor: 3.240

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