Literature DB >> 27746930

Crystal structure of an aryl cyclo-hexyl nona-noid, an anti-proliferative mol-ecule isolated from the spice Myristica malabarica.

Ajoy Kumar Bauri1, Sabine Foro2, Nhu Quynh Nguyen Do3.   

Abstract

The title compound, C21H26O5, an aryl cyclo-hexyl nona-noid {systematic name: 3,5-dihy-droxy-2-[9-(4-hy-droxy-phen-yl)nona-noyl]cyclo-hexa-2,4-dien-1-one}, extracted from the spice plant Myristica malabarica comprises two ring components, a 4-hy-droxy-phenyl moiety and a 3,5-di-hydroxy-cyclo-hexa-2,4-dienone moiety linked by a nona-noyl chain. The mol-ecule has an extended essentially planar conformation stabilized by an intra-molecular hy-droxy O-H⋯Ocarbon-yl hydrogen bond, giving a dihedral angle between the two ring systems of 6.37 (15)°. The C, O and H atoms associated with one of the hy-droxy groups of the cyclo-hexa-dienone component are disordered over two sets of sites with site occupancies of 0.6972 and 0.3028. In the crystal, hy-droxy O-H⋯O hydrogen bonds to carbonyl O-atom acceptors form large centrosymmetric R22(36) cyclic dimers, which are further extended into supra-molecular one-dimensional ribbon structures along [1-11].

Entities:  

Keywords:  M. malabarica; anti­proliferative activity; aryl cyclo­hexyl nona­noid; atom disorder and refinement; crystal structure; hydrogen bonding

Year:  2016        PMID: 27746930      PMCID: PMC5050765          DOI: 10.1107/S2056989016013797

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

The fruit rind of M. malabarica (family: Myristicaceae) is popularly known as Rampatri in Mumbai, India. It is used as an exotic spice in various Indian cuisines and also as a phytomedicine for the treatment of various kinds of ailments (Forrest & Heacock, 1972 ▸, and references therein). Its major pharmacological activities are credited with hepatoprotective (Morita et al., 2003 ▸), anti-carcinogenic (Patro et al., 2010 ▸; Maity et al., 2012 ▸), anti-leishmanial (Sen et al., 2007 ▸), anti-ulceral (Banerjee et al., 2007 ▸; Banerjee et al., 2008 ▸), anti­proliferative (Manna et al., 2012 ▸, 2015 ▸, 2016 ▸; Tyagi et al., 2014 ▸), anti-inflammatory (Maity et al., 2012 ▸), anti-quorum sensing (Chong et al., 2011 ▸) and anti-thrombotic (Olajide et al., 1999 ▸; Patro et al., 2005 ▸, 2010 ▸) properties and it is found as a constituent in many ayurvedic preparations such as Pasupasi. Previous phytochemical investigations of the fruit rind of M. malabarica revealed the presence of four novel diaryl nona­noids named as malabaricones AD (Purushothaman et al., 1977 ▸) and aryl tetra­deca­noid (Bauri et al., 2016 ▸). In addition, a lignan malabaricanol A and an isoflavone have been isolated from the heart wood of this plant (Purushothaman et al., 1974 ▸; Talukdar et al., 2000 ▸). A detailed phytochemical investigation of a methanol extract of the fruit rind of M. malabarica has been carried out. We have isolated a new type of mol­ecule named as an aryl cyclo­hexyl nona­noid, the title compound C21H26O5, as a very minor constituent in addition to the reported compounds malabaricones AD and aryl tetra­deca­noid. This mol­ecule has exhibited anti-proliferative activity against various cancer cell lines such as A431, U937, MOLT-3, A549 and A2780 by using MTT and western blotting assay (unpublished result). Therefore, based on experimental results, it may be inferred that this fruit rind of M. malabarica may be used as a health promoter, a natural remedy which can be prescribed as a botanical dietary supplement to patients who are suffering from these kinds of health problems. The structure of the title compound is reported herein.

Structural commentary

The title compound comprises three mol­ecular components, a 4-hy­droxy­phenyl ring, a 3,5-di­hydroxcyclo­hexa-2,5-dienone ring and a bridging nona­noyl moiety (Fig. 1 ▸). The cyclo­hexa­dienone ring has a puckered conformation. There is an intra­molecular O3—H⋯O4carbon­yl bond enclosing an S(6) ring motif, which aids in stabilizing the essentially planar overall mol­ecular conformation [inter-ring dihedral angle = 6.37 (15)° and r.m.s. deviation of fitted atoms = 0.2549 Å]. The C, O and H atoms associated with the second hy­droxy group of the cyclo­hexa­dienone component are disordered over two sets of sites (C4, O2, H2A and (C4′, O2′, H2B) with a site-occupancy factor of 0.6972:0.3028.
Figure 1

The mol­ecular structure of the title compound, showing the atom labeling and displacement ellipsoids drawn at the 50% probability level. The disordered hy­droxy group (C4—O2—H2A and C2′—O2′—H2B) is also shown, together with the intra­molecular O—H⋯O hydrogen bond.

Supra­molecular features

In the crystal, the mol­ecules are linked by hy­droxy O5—H⋯O1ii hydrogen bonds to carbonyl O-atom acceptors (Table 1 ▸), forming a primary large centrosymmetric (36) cyclic dimer (Fig. 2 ▸). These dimers are, in turn, linked through the disordered C4 hy­droxy group [O2—H⋯O5i and O2′—H′⋯O5i], extending the structure into a one-dimensional ribbon along [11] (Fig. 3 ▸). No inter-ring π–π inter­actions are present in the structure (minimum ring-centroid separation = 5.66 Å).
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2A⋯O5i 0.832.183.004 (7)174
O2′—H2B⋯O5i 0.821.862.565 (16)143
O3—H3O⋯O40.861.642.440 (3)153
O5—H5O⋯O1ii 0.831.862.687 (3)172

Symmetry codes: (i) ; (ii) .

Figure 2

Centrosymmetric dimer formation in the crystal packing of the title compound, with inter­molecular hydrogen bonds shown as dashed lines.

Figure 3

A view of the crystal packing in the unit cell, showing dimer extension into one-dimensional ribbons extending along [11]. Blue- and orange-coloured dashed lines indicate the intra- and inter­molecular O—H⋯O hydrogen bonding. Only H atoms involved in hydrogen bonds are shown.

Database survey

A search of the Cambridge Structural Database (CSD, Version 5.37, updates November, 2015; Groom et al., 2016 ▸) has registered two hits for the compounds found in M. malabarica: malabaricone-A (Bauri et al., 2006a ▸) and malabaricone-C monohydrate (Bauri et al., 2006b ▸), but no other examples were found resembling the title compound.

Synthesis and crystallization

The compound has been isolated as a very minor constituent from a methanol extraction of the fruit rind of M. malabarica by using CC/SiO2 with gradient solvent elution with a binary mixture of solvent methanol and chloro­form. Suitable crystals for X-ray data collection were obtained after recrystallization (×3) from hexa­ne:ethyl acetate (4:1), by slow evaporation at room temperature. The NMR spectroscopic analysis of the crystallized product has been inter­preted as follows. 1H NMR data (acetone-d 6, 200 MHz): 8.80 (s, brs-OH, 1H), 6.89 (dd, 1H, J = 8.2 Hz, H-2′′ & H-6′′, 2 × Ar-H), 6.59 (dd, 2H, J = 8.2 Hz, H-3′′ & H-5′′, 2 × Ar-H), 4.20–4.15 (m, 1H, H-6), 2.90 (dd, 2H, J = 7.0 Hz, H-2′), 2.61–2.43 (dd, 2H, J = 2.20 Hz each, H-4), 2.39 (dd, 2H, J = 7.0 Hz, H-9) 1.67–1.40 (m, 4H, H-3′ & H-8′), 1.19 (s, 8H, 4 × –CH2 H-4′ H-5′, H-6′ & H-7′). 13C NMR data (50 MHz,acetone-d 6): 205.69 (C-1′, >C=O), 198 (C-1, >C=O), 194 (C-3 & C-5, >C=C—OH), 156.20 (C-4′′, Ar—C—OH), 129.94 (C-2′′ & C-6′′, 2 × Ar—C—H), 116.6 (C-3′ & C-5′, Ar—C—H), 134.12 (C-6, >C=C<), 113.60 (C-2, >C=C<), 47.58 (C-2′, –CH2—CO–), 42.13 (C-9′, Ar—CH2), 40.57 (C-3′, –CH2—CH2), 35.56 (C-4′, –CH2—CH2–), 32.37 (C-6′, –CH2—CH2), 30.19 (C-3′, –CH2—CH2–), 25.40 (C-5′, –CH2).

Refinement

Crystal data, data collection and structure refinement details are summarized in Table 2 ▸. The H atoms were positioned with idealized geometry using a riding model with aromatic C—H = 0.93 Å (aromatic) or 0.97 Å (methyl­ene). The H atoms of the OH groups were located in a difference map and were refined as riding on their parent O atoms. All H atoms were refined with isotropic displacement parameters set at 1.2 U eq of the parent atom. The atoms C4 and O2 are disordered and were refined using a split model with site-occupancy factors 0.6972:0.3028. The corresponding bond distances in the disordered groups were restrained to be equal. The reflections 0 14 and 0 0 7 had poor disagreement with their calculated values and were omitted from the refinement.
Table 2

Experimental details

Crystal data
Chemical formulaC21H26O5
M r 358.42
Crystal system, space groupTriclinic, P
Temperature (K)293
a, b, c (Å)5.6630 (8), 8.707 (1), 20.152 (3)
α, β, γ (°)81.69 (1), 86.48 (1), 88.48 (1)
V3)981.2 (2)
Z 2
Radiation typeMo Kα
μ (mm−1)0.09
Crystal size (mm)0.48 × 0.48 × 0.20
 
Data collection
DiffractometerOxford Diffraction Xcalibur diffractometer with Sapphire CCD detector
Absorption correctionMulti-scan (CrysAlis RED; Oxford Diffraction, 2009)
T min, T max 0.960, 0.983
No. of measured, independent and observed [I > 2σ(I)] reflections6013, 3552, 2638
R int 0.013
(sin θ/λ)max−1)0.602
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.071, 0.178, 1.10
No. of reflections3552
No. of parameters254
No. of restraints3
H-atom treatmentH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.36, −0.20

Computer programs: CrysAlis CCD and CrysAlis RED (Oxford Diffraction, 2009 ▸), SHELXS2014 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and PLATON (Spek, 2009 ▸).

Crystal structure: contains datablock(s) I, 1R. DOI: 10.1107/S2056989016013797/zs2367sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989016013797/zs2367Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989016013797/zs2367Isup3.cml CCDC reference: 1501296 Additional supporting information: crystallographic information; 3D view; checkCIF report
C21H26O5Z = 2
Mr = 358.42F(000) = 384
Triclinic, P1Dx = 1.213 Mg m3
a = 5.6630 (8) ÅMo Kα radiation, λ = 0.71073 Å
b = 8.707 (1) ÅCell parameters from 2139 reflections
c = 20.152 (3) Åθ = 2.9–27.7°
α = 81.69 (1)°µ = 0.09 mm1
β = 86.48 (1)°T = 293 K
γ = 88.48 (1)°Prism, yellow
V = 981.2 (2) Å30.48 × 0.48 × 0.20 mm
Oxford Diffraction Xcalibur diffractometer with Sapphire CCD detector2638 reflections with I > 2σ(I)
Radiation source: Enhance (Mo) X-ray sourceRint = 0.013
Rotation method data acquisition using ω scansθmax = 25.4°, θmin = 2.9°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)h = −6→6
Tmin = 0.960, Tmax = 0.983k = −10→10
6013 measured reflectionsl = −21→24
3552 independent reflections
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.071H-atom parameters constrained
wR(F2) = 0.178w = 1/[σ2(Fo2) + (0.0517P)2 + 0.9321P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max < 0.001
3552 reflectionsΔρmax = 0.36 e Å3
254 parametersΔρmin = −0.20 e Å3
Experimental. Absorption correction: CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/UeqOcc. (<1)
O1−0.0508 (4)−0.0225 (3)0.83338 (11)0.0664 (7)
O20.1863 (14)−0.3525 (8)1.0267 (3)0.0655 (19)0.6972
H2A0.2365−0.29361.05100.079*0.6972
O2'0.254 (4)−0.310 (2)1.0277 (7)0.069 (5)0.3028
H2B0.2933−0.22591.03800.083*0.3028
O30.6549 (4)−0.3272 (3)0.82020 (11)0.0658 (7)
H3O0.6550−0.27960.77980.079*
O40.5334 (4)−0.1694 (3)0.71742 (10)0.0673 (7)
O5−0.5995 (4)0.8647 (2)0.10839 (10)0.0617 (6)
H5O−0.71280.90540.12830.074*
C10.3066 (5)−0.1679 (3)0.81894 (13)0.0427 (6)
C20.1065 (5)−0.1099 (3)0.85825 (14)0.0481 (7)
C30.0917 (6)−0.1598 (4)0.93293 (15)0.0742 (11)
H30.0167−0.09880.96250.089*
C40.2009 (10)−0.3083 (6)0.9562 (2)0.0636 (14)0.6972
C4'0.3050 (18)−0.2280 (11)0.9622 (4)0.046 (2)0.3028
C50.4429 (6)−0.3327 (4)0.92481 (15)0.0605 (9)
H5A0.5567−0.28190.94800.073*
H5B0.4808−0.44300.93130.073*
C60.4698 (5)−0.2731 (3)0.85166 (14)0.0470 (7)
C70.3503 (5)−0.1185 (3)0.74718 (14)0.0467 (7)
C80.1815 (5)−0.0110 (3)0.70682 (14)0.0501 (7)
H8A0.15660.08190.72790.060*
H8B0.0303−0.06160.70840.060*
C90.2634 (6)0.0367 (4)0.63382 (14)0.0566 (8)
H9A0.3025−0.05530.61310.068*
H9B0.40490.09810.63140.068*
C100.0701 (6)0.1314 (4)0.59556 (15)0.0598 (8)
H10A−0.06720.06700.59590.072*
H10B0.02310.21860.61870.072*
C110.1480 (6)0.1921 (4)0.52332 (15)0.0627 (9)
H11A0.20420.10530.50100.075*
H11B0.27960.26120.52320.075*
C12−0.0481 (6)0.2792 (4)0.48314 (15)0.0614 (9)
H12A−0.18080.21080.48360.074*
H12B−0.10270.36720.50480.074*
C130.0332 (6)0.3360 (4)0.41130 (15)0.0599 (8)
H13A0.08650.24740.38990.072*
H13B0.16790.40260.41130.072*
C14−0.1574 (6)0.4262 (3)0.36914 (14)0.0528 (7)
H14A−0.29630.36270.37050.063*
H14B−0.20360.51970.38800.063*
C15−0.0638 (5)0.4693 (4)0.29700 (15)0.0553 (8)
H15A−0.03140.37380.27830.066*
H15B0.08630.52010.29750.066*
C16−0.2175 (5)0.5731 (3)0.24928 (14)0.0433 (6)
C17−0.4281 (5)0.6465 (3)0.26883 (14)0.0486 (7)
H17−0.48190.62970.31380.058*
C18−0.5602 (5)0.7439 (3)0.22330 (14)0.0492 (7)
H18−0.70010.79060.23760.059*
C19−0.4795 (5)0.7697 (3)0.15660 (14)0.0458 (7)
C20−0.2681 (5)0.6987 (3)0.13615 (14)0.0528 (8)
H20−0.21280.71690.09130.063*
C21−0.1409 (5)0.6019 (3)0.18188 (14)0.0502 (7)
H21−0.00150.55500.16730.060*
U11U22U33U12U13U23
O10.0639 (14)0.0742 (15)0.0563 (13)0.0366 (12)−0.0044 (10)0.0007 (11)
O20.082 (5)0.068 (4)0.043 (2)0.013 (3)0.005 (2)−0.001 (2)
O2'0.107 (13)0.067 (9)0.032 (5)−0.021 (6)−0.013 (5)0.004 (5)
O30.0579 (13)0.0792 (15)0.0541 (12)0.0328 (12)0.0045 (10)0.0024 (11)
O40.0666 (15)0.0829 (16)0.0474 (12)0.0210 (12)0.0073 (10)−0.0015 (11)
O50.0625 (14)0.0668 (14)0.0496 (12)0.0272 (11)−0.0018 (10)0.0066 (10)
C10.0426 (15)0.0434 (15)0.0404 (14)0.0073 (12)−0.0031 (11)−0.0018 (11)
C20.0477 (16)0.0482 (16)0.0463 (16)0.0125 (13)−0.0043 (13)−0.0017 (13)
C30.073 (2)0.099 (3)0.0426 (17)0.044 (2)0.0076 (16)0.0028 (17)
C40.078 (4)0.070 (3)0.036 (2)0.032 (3)0.010 (2)0.006 (2)
C4'0.068 (7)0.040 (5)0.030 (5)−0.002 (5)−0.007 (4)−0.005 (4)
C50.062 (2)0.068 (2)0.0464 (17)0.0210 (16)−0.0074 (14)0.0038 (15)
C60.0430 (16)0.0492 (16)0.0470 (16)0.0106 (13)−0.0005 (12)−0.0041 (13)
C70.0523 (17)0.0438 (15)0.0437 (15)0.0036 (13)−0.0044 (13)−0.0053 (12)
C80.0565 (18)0.0486 (16)0.0429 (15)0.0030 (14)−0.0080 (13)0.0019 (12)
C90.071 (2)0.0545 (18)0.0433 (16)0.0027 (15)−0.0105 (14)0.0005 (13)
C100.078 (2)0.0532 (18)0.0467 (17)0.0009 (16)−0.0139 (15)0.0031 (14)
C110.081 (2)0.0580 (19)0.0471 (17)0.0033 (17)−0.0151 (16)0.0034 (14)
C120.081 (2)0.0522 (18)0.0492 (17)0.0053 (16)−0.0117 (16)0.0014 (14)
C130.074 (2)0.0544 (18)0.0488 (17)0.0063 (16)−0.0148 (15)0.0037 (14)
C140.0605 (19)0.0465 (16)0.0492 (17)0.0035 (14)−0.0075 (14)0.0018 (13)
C150.0510 (18)0.0560 (18)0.0542 (18)0.0050 (14)−0.0073 (14)0.0082 (14)
C160.0428 (15)0.0400 (14)0.0455 (15)0.0013 (12)−0.0052 (12)0.0001 (12)
C170.0486 (17)0.0539 (17)0.0400 (15)0.0034 (13)0.0017 (12)0.0012 (13)
C180.0437 (16)0.0503 (17)0.0518 (17)0.0084 (13)0.0025 (13)−0.0048 (13)
C190.0462 (16)0.0431 (15)0.0461 (15)0.0081 (13)−0.0040 (12)−0.0003 (12)
C200.0544 (18)0.0581 (18)0.0424 (15)0.0147 (15)0.0031 (13)−0.0009 (13)
C210.0461 (17)0.0520 (17)0.0504 (16)0.0140 (13)0.0004 (13)−0.0039 (13)
O1—C21.238 (3)C10—C111.518 (4)
O2—C41.415 (7)C10—H10A0.9700
O2—H2A0.8256C10—H10B0.9700
O2'—H2B0.8247C11—C121.534 (4)
O3—C61.305 (3)C11—H11A0.9700
O3—H3O0.8588C11—H11B0.9700
O4—C71.268 (3)C12—C131.509 (4)
O5—C191.382 (3)C12—H12A0.9700
O5—H5O0.8342C12—H12B0.9700
C1—C61.408 (4)C13—C141.543 (4)
C1—C71.456 (4)C13—H13A0.9700
C1—C21.463 (4)C13—H13B0.9700
C2—C31.503 (4)C14—C151.514 (4)
C3—C41.446 (5)C14—H14A0.9700
C3—C4'1.452 (10)C14—H14B0.9700
C3—H30.9300C15—C161.519 (4)
C4—C51.497 (5)C15—H15A0.9700
C4'—C51.449 (9)C15—H15B0.9700
C5—C61.490 (4)C16—C211.390 (4)
C5—H5A0.9700C16—C171.400 (4)
C5—H5B0.9700C17—C181.395 (4)
C7—C81.510 (4)C17—H170.9300
C8—C91.517 (4)C18—C191.382 (4)
C8—H8A0.9700C18—H180.9300
C8—H8B0.9700C19—C201.400 (4)
C9—C101.531 (4)C20—C211.379 (4)
C9—H9A0.9700C20—H200.9300
C9—H9B0.9700C21—H210.9300
C4—O2—H2A119.3C10—C11—C12113.8 (3)
C6—O3—H3O105.4C10—C11—H11A108.8
C19—O5—H5O107.1C12—C11—H11A108.8
C6—C1—C7117.7 (2)C10—C11—H11B108.8
C6—C1—C2119.2 (2)C12—C11—H11B108.8
C7—C1—C2123.1 (2)H11A—C11—H11B107.7
O1—C2—C1123.6 (3)C13—C12—C11112.6 (3)
O1—C2—C3118.4 (3)C13—C12—H12A109.1
C1—C2—C3118.0 (2)C11—C12—H12A109.1
C4—C3—C2116.1 (3)C13—C12—H12B109.1
C4'—C3—C2116.5 (4)C11—C12—H12B109.1
C4—C3—H3122.0H12A—C12—H12B107.8
C2—C3—H3122.0C12—C13—C14114.5 (3)
O2—C4—C3115.1 (5)C12—C13—H13A108.6
O2—C4—C5113.0 (5)C14—C13—H13A108.6
C3—C4—C5114.4 (4)C12—C13—H13B108.6
C5—C4'—C3117.1 (6)C14—C13—H13B108.6
C4'—C5—C6112.4 (4)H13A—C13—H13B107.6
C6—C5—C4114.3 (3)C15—C14—C13110.4 (3)
C6—C5—H5A108.7C15—C14—H14A109.6
C4—C5—H5A108.7C13—C14—H14A109.6
C6—C5—H5B108.7C15—C14—H14B109.6
C4—C5—H5B108.7C13—C14—H14B109.6
H5A—C5—H5B107.6H14A—C14—H14B108.1
O3—C6—C1122.7 (3)C14—C15—C16118.1 (3)
O3—C6—C5114.7 (2)C14—C15—H15A107.8
C1—C6—C5122.6 (2)C16—C15—H15A107.8
O4—C7—C1119.1 (2)C14—C15—H15B107.8
O4—C7—C8119.0 (2)C16—C15—H15B107.8
C1—C7—C8122.0 (2)H15A—C15—H15B107.1
C7—C8—C9114.7 (3)C21—C16—C17117.4 (2)
C7—C8—H8A108.6C21—C16—C15118.1 (3)
C9—C8—H8A108.6C17—C16—C15124.5 (3)
C7—C8—H8B108.6C18—C17—C16122.4 (3)
C9—C8—H8B108.6C18—C17—H17118.8
H8A—C8—H8B107.6C16—C17—H17118.8
C8—C9—C10110.7 (3)C19—C18—C17118.8 (3)
C8—C9—H9A109.5C19—C18—H18120.6
C10—C9—H9A109.5C17—C18—H18120.6
C8—C9—H9B109.5O5—C19—C18122.4 (2)
C10—C9—H9B109.5O5—C19—C20117.9 (2)
H9A—C9—H9B108.1C18—C19—C20119.7 (2)
C11—C10—C9113.2 (3)C21—C20—C19120.6 (3)
C11—C10—H10A108.9C21—C20—H20119.7
C9—C10—H10A108.9C19—C20—H20119.7
C11—C10—H10B108.9C20—C21—C16121.2 (3)
C9—C10—H10B108.9C20—C21—H21119.4
H10A—C10—H10B107.8C16—C21—H21119.4
C6—C1—C2—O1−176.9 (3)C6—C1—C7—C8177.6 (3)
C7—C1—C2—O15.0 (5)C2—C1—C7—C8−4.3 (4)
C6—C1—C2—C33.0 (4)O4—C7—C8—C9−5.2 (4)
C7—C1—C2—C3−175.1 (3)C1—C7—C8—C9176.1 (3)
O1—C2—C3—C4152.2 (4)C7—C8—C9—C10174.2 (3)
C1—C2—C3—C4−27.6 (5)C8—C9—C10—C11176.0 (3)
O1—C2—C3—C4'−164.8 (5)C9—C10—C11—C12176.6 (3)
C1—C2—C3—C4'15.4 (7)C10—C11—C12—C13−179.1 (3)
C2—C3—C4—O2179.6 (5)C11—C12—C13—C14−179.2 (3)
C2—C3—C4—C546.1 (6)C12—C13—C14—C15−176.4 (3)
C2—C3—C4'—C5−40.0 (10)C13—C14—C15—C16−173.8 (3)
C3—C4'—C5—C643.6 (9)C14—C15—C16—C21−174.6 (3)
O2—C4—C5—C6−174.4 (5)C14—C15—C16—C177.6 (5)
C3—C4—C5—C6−39.9 (6)C21—C16—C17—C180.6 (4)
C7—C1—C6—O3−0.4 (4)C15—C16—C17—C18178.4 (3)
C2—C1—C6—O3−178.6 (3)C16—C17—C18—C19−0.4 (5)
C7—C1—C6—C5−179.6 (3)C17—C18—C19—O5−179.9 (3)
C2—C1—C6—C52.2 (5)C17—C18—C19—C20−0.2 (4)
C4'—C5—C6—O3155.7 (5)O5—C19—C20—C21−179.6 (3)
C4—C5—C6—O3−163.2 (4)C18—C19—C20—C210.7 (5)
C4'—C5—C6—C1−25.0 (6)C19—C20—C21—C16−0.5 (5)
C4—C5—C6—C116.1 (5)C17—C16—C21—C20−0.1 (4)
C6—C1—C7—O4−1.1 (4)C15—C16—C21—C20−178.1 (3)
C2—C1—C7—O4177.0 (3)
D—H···AD—HH···AD···AD—H···A
O2—H2A···O5i0.832.183.004 (7)174
O2′—H2B···O5i0.821.862.565 (16)143
O3—H3O···O40.861.642.440 (3)153
O5—H5O···O1ii0.831.862.687 (3)172
  19 in total

1.  An isoflavone from Myristica malabarica.

Authors:  A C Talukdar; N Jain; S De; H G Krishnamurty
Journal:  Phytochemistry       Date:  2000-01       Impact factor: 4.072

2.  Healing properties of malabaricone B and malabaricone C, against indomethacin-induced gastric ulceration and mechanism of action.

Authors:  Debashish Banerjee; Ajay K Bauri; Ranjit K Guha; Sandip K Bandyopadhyay; Subrata Chattopadhyay
Journal:  Eur J Pharmacol       Date:  2007-10-05       Impact factor: 4.432

3.  Molecular mechanism of the anti-inflammatory activity of a natural diarylnonanoid, malabaricone C.

Authors:  Biswanath Maity; Sudhir Kumar Yadav; Birija S Patro; Mrityunjay Tyagi; Sandip Kumar Bandyopadhyay; Subrata Chattopadhyay
Journal:  Free Radic Biol Med       Date:  2012-02-15       Impact factor: 7.376

4.  Biological effects of Myristica fragrans (nutmeg) extract.

Authors:  O A Olajide; F F Ajayi; A I Ekhelar; S O Awe; J M Makinde; A R Alada
Journal:  Phytother Res       Date:  1999-06       Impact factor: 5.878

5.  Hepatoprotective effect of myristicin from nutmeg (Myristica fragrans) on lipopolysaccharide/d-galactosamine-induced liver injury.

Authors:  Tatsuya Morita; Keiko Jinno; Hirokazu Kawagishi; Yasushi Arimoto; Hiroyuki Suganuma; Takahiro Inakuma; Kimio Sugiyama
Journal:  J Agric Food Chem       Date:  2003-03-12       Impact factor: 5.279

6.  DNA damage dependent activation of checkpoint kinase-1 and mitogen-activated protein kinase-p38 are required in malabaricone C-induced mitochondrial cell death.

Authors:  Mrityunjay Tyagi; Rahul Bhattacharyya; Ajay Kumar Bauri; Birija Sankar Patro; Subrata Chattopadhyay
Journal:  Biochim Biophys Acta       Date:  2013-11-27

7.  Malabaricones A--D, novel diarylnonanoids from Myristica malabarica Lam (Myristicaceae).

Authors:  K K Purushothaman; A Sarada; J D Connolly
Journal:  J Chem Soc Perkin 1       Date:  1977

8.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

9.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

10.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
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