Literature DB >> 27742211

Notes and tips for improving quality of lipid-protein overlay assays.

Carolyn M Shirey1, Jordan L Scott1, Robert V Stahelin2.   

Abstract

To reduce costs of lipid-binding assays, allow for multiple lipids to be screened for protein binding simultaneously, and to make lipid binding more user friendly, lipids have been dotted onto membranes to investigate lipid-protein interactions. These assays are similar to a western blot where the membrane is blocked, incubated with a protein of interest and detected using antibodies. Although the assay is inexpensive and straightforward, problems with promiscuous or poor binding, as well as insufficient blocking occur frequently. In this technical note, we share several specific improvements to ensure lipid-protein overlay assays are of high quality and contain proper controls.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Lipid blots; Lipid-protein interactions; PIP strips; Phosphoinositides; Protein-lipid overlay

Mesh:

Substances:

Year:  2016        PMID: 27742211      PMCID: PMC5097677          DOI: 10.1016/j.ab.2016.10.009

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  10 in total

1.  Heterodimeric capping protein from Arabidopsis is regulated by phosphatidic acid.

Authors:  Shanjin Huang; Lisa Gao; Laurent Blanchoin; Christopher J Staiger
Journal:  Mol Biol Cell       Date:  2006-01-25       Impact factor: 4.138

Review 2.  Determining selectivity of phosphoinositide-binding domains.

Authors:  Kartik Narayan; Mark A Lemmon
Journal:  Methods       Date:  2006-06       Impact factor: 3.608

3.  A phosphatidylinositol 4-kinase pleckstrin homology domain that binds phosphatidylinositol 4-monophosphate.

Authors:  J M Stevenson; I Y Perera; W F Boss
Journal:  J Biol Chem       Date:  1998-08-28       Impact factor: 5.157

4.  Differential roles of phosphatidylserine, PtdIns(4,5)P2, and PtdIns(3,4,5)P3 in plasma membrane targeting of C2 domains. Molecular dynamics simulation, membrane binding, and cell translocation studies of the PKCalpha C2 domain.

Authors:  Debasis Manna; Nitin Bhardwaj; Mohsin S Vora; Robert V Stahelin; Hui Lu; Wonhwa Cho
Journal:  J Biol Chem       Date:  2008-07-11       Impact factor: 5.157

5.  Lipid binding regulates synaptic targeting of PICK1, AMPA receptor trafficking, and synaptic plasticity.

Authors:  Wenying Jin; Woo-Ping Ge; Junyu Xu; Mian Cao; Lisheng Peng; Wingho Yung; Dezhi Liao; Shumin Duan; Mingjie Zhang; Jun Xia
Journal:  J Neurosci       Date:  2006-03-01       Impact factor: 6.167

6.  PLIF: A rapid, accurate method to detect and quantitatively assess protein-lipid interactions.

Authors:  Laurie Ceccato; Gaëtan Chicanne; Virginie Nahoum; Véronique Pons; Bernard Payrastre; Frédérique Gaits-Iacovoni; Julien Viaud
Journal:  Sci Signal       Date:  2016-03-29       Impact factor: 8.192

7.  Genome-wide analysis of membrane targeting by S. cerevisiae pleckstrin homology domains.

Authors:  Jong W Yu; Jeannine M Mendrola; Anjon Audhya; Shaneen Singh; David Keleti; Daryll B DeWald; Diana Murray; Scott D Emr; Mark A Lemmon
Journal:  Mol Cell       Date:  2004-03-12       Impact factor: 17.970

8.  Role of the Ca2+/phosphatidylserine binding region of the C2 domain in the translocation of protein kinase Calpha to the plasma membrane.

Authors:  Stephen R Bolsover; Juan C Gomez-Fernandez; Senena Corbalan-Garcia
Journal:  J Biol Chem       Date:  2003-01-13       Impact factor: 5.157

9.  Surface plasmon resonance: a useful technique for cell biologists to characterize biomolecular interactions.

Authors:  Robert V Stahelin
Journal:  Mol Biol Cell       Date:  2013-04       Impact factor: 4.138

10.  Rab1 guanine nucleotide exchange factor SidM is a major phosphatidylinositol 4-phosphate-binding effector protein of Legionella pneumophila.

Authors:  Eva Brombacher; Simon Urwyler; Curdin Ragaz; Stefan S Weber; Keiichiro Kami; Michael Overduin; Hubert Hilbi
Journal:  J Biol Chem       Date:  2008-12-17       Impact factor: 5.157

  10 in total
  5 in total

1.  A pan-apicomplexan phosphoinositide-binding protein acts in malarial microneme exocytosis.

Authors:  Zeinab Ebrahimzadeh; Angana Mukherjee; Marie-Ève Crochetière; Audrey Sergerie; Souad Amiar; L Alexa Thompson; Dominic Gagnon; David Gaumond; Robert V Stahelin; Joel B Dacks; Dave Richard
Journal:  EMBO Rep       Date:  2019-05-16       Impact factor: 8.807

Review 2.  Characterization of Protein-Membrane Interactions in Yeast Autophagy.

Authors:  Kelsie A Leary; Michael J Ragusa
Journal:  Cells       Date:  2022-06-09       Impact factor: 7.666

3.  Profilin choreographs actin and microtubules in cells and cancer.

Authors:  Morgan L Pimm; Jessica Hotaling; Jessica L Henty-Ridilla
Journal:  Int Rev Cell Mol Biol       Date:  2020-07-16       Impact factor: 6.813

4.  Lipid Interactions of a Ciliary Membrane TRP Channel: Simulation and Structural Studies of Polycystin-2.

Authors:  Qinrui Wang; Robin A Corey; George Hedger; Prafulla Aryal; Mariana Grieben; Chady Nasrallah; Agnese Baronina; Ashley C W Pike; Jiye Shi; Elisabeth P Carpenter; Mark S P Sansom
Journal:  Structure       Date:  2019-12-02       Impact factor: 5.871

5.  Molecular characterization of a fungal gasdermin-like protein.

Authors:  Asen Daskalov; Patrick S Mitchell; Andrew Sandstrom; Russell E Vance; N Louise Glass
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-23       Impact factor: 12.779

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.