Literature DB >> 27738100

Novel Compounds Targeting the Mitochondrial Protein VDAC1 Inhibit Apoptosis and Protect against Mitochondrial Dysfunction.

Danya Ben-Hail1, Racheli Begas-Shvartz1, Moran Shalev1, Anna Shteinfer-Kuzmine1, Arie Gruzman2, Simona Reina3,4, Vito De Pinto3, Varda Shoshan-Barmatz5.   

Abstract

Apoptosis is thought to play a critical role in several pathological processes, such as neurodegenerative diseases (i.e. Parkinson's and Alzheimer's diseases) and various cardiovascular diseases. Despite the fact that apoptotic mechanisms are well defined, there is still no substantial therapeutic strategy to stop or even slow this process. Thus, there is an unmet need for therapeutic agents that are able to block or slow apoptosis in neurodegenerative and cardiovascular diseases. The outer mitochondrial membrane protein voltage-dependent anion channel 1 (VDAC1) is a convergence point for a variety of cell survival and death signals, including apoptosis. Recently, we demonstrated that VDAC1 oligomerization is involved in mitochondrion-mediated apoptosis. Thus, VDAC1 oligomerization represents a prime target for agents designed to modulate apoptosis. Here, high-throughput compound screening and medicinal chemistry were employed to develop compounds that directly interact with VDAC1 and prevent VDAC1 oligomerization, concomitant with an inhibition of apoptosis as induced by various means and in various cell lines. The compounds protected against apoptosis-associated mitochondrial dysfunction, restoring dissipated mitochondrial membrane potential, and thus cell energy and metabolism, decreasing reactive oxidative species production, and preventing detachment of hexokinase bound to mitochondria and disruption of intracellular Ca2+ levels. Thus, this study describes novel drug candidates with a defined mechanism of action that involves inhibition of VDAC1 oligomerization, apoptosis, and mitochondrial dysfunction. The compounds VBIT-3 and VBIT-4 offer a therapeutic strategy for treating different diseases associated with enhanced apoptosis and point to VDAC1 as a promising target for therapeutic intervention.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  apoptosis; bioluminescence resonance energy transfer (BRET); drug development; membrane protein; mitochondria; mitochondrial apoptosis; oligomerization; small molecule; voltage-dependent anion channel (VDAC)

Mesh:

Substances:

Year:  2016        PMID: 27738100      PMCID: PMC5122769          DOI: 10.1074/jbc.M116.744284

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  91 in total

Review 1.  The voltage-dependent anion channel (VDAC): function in intracellular signalling, cell life and cell death.

Authors:  V Shoshan-Barmatz; A Israelson; D Brdiczka; S S Sheu
Journal:  Curr Pharm Des       Date:  2006       Impact factor: 3.116

Review 2.  Arsenic trioxide mechanisms of action--looking beyond acute promyelocytic leukemia.

Authors:  Dennis A Carney
Journal:  Leuk Lymphoma       Date:  2008-10

Review 3.  The mitochondrial voltage-dependent anion channel 1 in tumor cells.

Authors:  Varda Shoshan-Barmatz; Danya Ben-Hail; Lee Admoni; Yakov Krelin; Shambhoo Sharan Tripathi
Journal:  Biochim Biophys Acta       Date:  2014-11-04

4.  VDAC1 cysteine residues: topology and function in channel activity and apoptosis.

Authors:  Lior Aram; Shay Geula; Nir Arbel; Varda Shoshan-Barmatz
Journal:  Biochem J       Date:  2010-04-14       Impact factor: 3.857

5.  Dystrophic neurites of senile plaques in Alzheimer's disease are deficient in cytochrome c oxidase.

Authors:  Esther Pérez-Gracia; Benjamín Torrejón-Escribano; Isidre Ferrer
Journal:  Acta Neuropathol       Date:  2008-07-16       Impact factor: 17.088

6.  Functional characterization of a second porin isoform in Drosophila melanogaster. DmPorin2 forms voltage-independent cation-selective pores.

Authors:  Rita Aiello; Angela Messina; Bettina Schiffler; Roland Benz; Gianluca Tasco; Rita Casadio; Vito De Pinto
Journal:  J Biol Chem       Date:  2004-03-30       Impact factor: 5.157

Review 7.  Regulation of hexokinase binding to VDAC.

Authors:  John G Pastorino; Jan B Hoek
Journal:  J Bioenerg Biomembr       Date:  2008-06       Impact factor: 2.945

8.  Reconstitution of purified VDAC1 into a lipid bilayer and recording of channel conductance.

Authors:  Danya Ben-Hail; Varda Shoshan-Barmatz
Journal:  Cold Spring Harb Protoc       Date:  2014-01-01

9.  The BRET2/arrestin assay in stable recombinant cells: a platform to screen for compounds that interact with G protein-coupled receptors (GPCRS).

Authors:  Lucie Bertrand; Stéphane Parent; Mireille Caron; Mireille Legault; Erik Joly; Stéphane Angers; Michel Bouvier; Mike Brown; Benoit Houle; Luc Ménard
Journal:  J Recept Signal Transduct Res       Date:  2002 Feb-Nov       Impact factor: 2.092

10.  A role for voltage-dependent anion channel Vdac1 in polyglutamine-mediated neuronal cell death.

Authors:  Tanay Ghosh; Neeraj Pandey; Arindam Maitra; Samir K Brahmachari; Beena Pillai
Journal:  PLoS One       Date:  2007-11-14       Impact factor: 3.240

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  33 in total

1.  VDAC1 in the diseased myocardium and the effect of VDAC1-interacting compound on atrial fibrosis induced by hyperaldosteronism.

Authors:  Hadar Klapper-Goldstein; Ankit Verma; Sigal Elyagon; Roni Gillis; Michael Murninkas; Srinivas Pittala; Avijit Paul; Varda Shoshan-Barmatz; Yoram Etzion
Journal:  Sci Rep       Date:  2020-12-16       Impact factor: 4.379

2.  VDAC oligomers form mitochondrial pores to release mtDNA fragments and promote lupus-like disease.

Authors:  Jeonghan Kim; Rajeev Gupta; Luz P Blanco; Shutong Yang; Anna Shteinfer-Kuzmine; Kening Wang; Jun Zhu; Hee Eun Yoon; Xinghao Wang; Martijn Kerkhofs; Hyeog Kang; Alexandra L Brown; Sung-Jun Park; Xihui Xu; Eddy Zandee van Rilland; Myung K Kim; Jeffrey I Cohen; Mariana J Kaplan; Varda Shoshan-Barmatz; Jay H Chung
Journal:  Science       Date:  2019-12-19       Impact factor: 47.728

3.  Protonation state of glutamate 73 regulates the formation of a specific dimeric association of mVDAC1.

Authors:  Lucie A Bergdoll; Michael T Lerch; John W Patrick; Kendrick Belardo; Christian Altenbach; Paola Bisignano; Arthur Laganowsky; Michael Grabe; Wayne L Hubbell; Jeff Abramson
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-26       Impact factor: 11.205

4.  The pro-apoptotic domain of BIM protein forms toxic amyloid fibrils.

Authors:  Ravit Malishev; Shani Ben-Zichri; Ofek Oren; Nitzan Shauloff; Tal Peretz; Ran Taube; Niv Papo; Raz Jelinek
Journal:  Cell Mol Life Sci       Date:  2020-08-25       Impact factor: 9.261

5.  Novel function of ceramide for regulation of mitochondrial ATP release in astrocytes.

Authors:  Ji-Na Kong; Zhihui Zhu; Yutaka Itokazu; Guanghu Wang; Michael B Dinkins; Liansheng Zhong; Hsuan-Pei Lin; Ahmed Elsherbini; Silvia Leanhart; Xue Jiang; Haiyan Qin; Wenbo Zhi; Stefka D Spassieva; Erhard Bieberich
Journal:  J Lipid Res       Date:  2018-01-10       Impact factor: 5.922

6.  Assessing Mitochondrial DNA Release into the Cytosol and Subsequent Activation of Innate Immune-related Pathways in Mammalian Cells.

Authors:  Joshua D Bryant; Yuanjiu Lei; Jordyn J VanPortfliet; Ashley D Winters; A Phillip West
Journal:  Curr Protoc       Date:  2022-02

7.  Protecting mitochondria via inhibiting VDAC1 oligomerization alleviates ferroptosis in acetaminophen-induced acute liver injury.

Authors:  Baolin Niu; Xiaohong Lei; Qingling Xu; Yi Ju; Dongke Xu; Liya Mao; Jing Li; Yufan Zheng; Ning Sun; Xin Zhang; Yimin Mao; Xiaobo Li
Journal:  Cell Biol Toxicol       Date:  2021-08-17       Impact factor: 6.691

8.  A small molecule interacts with VDAC2 to block mouse BAK-driven apoptosis.

Authors:  David C S Huang; Guillaume Lessene; Benjamin T Kile; Mark F van Delft; Stephane Chappaz; Yelena Khakham; Chinh T Bui; Marlyse A Debrincat; Kym N Lowes; Jason M Brouwer; Christoph Grohmann; Phillip P Sharp; Laura F Dagley; Lucy Li; Kate McArthur; Meng-Xiao Luo; Hui San Chin; W Douglas Fairlie; Erinna F Lee; David Segal; Stephane Duflocq; Romina Lessene; Sabrina Bernard; Laure Peilleron; Thao Nguyen; Caroline Miles; Soo San Wan; Rachael M Lane; Ahmad Wardak; Kurt Lackovic; Peter M Colman; Jarrod J Sandow; Andrew I Webb; Peter E Czabotar; Grant Dewson; Keith G Watson
Journal:  Nat Chem Biol       Date:  2019-10-07       Impact factor: 15.040

Review 9.  Too much death can kill you: inhibiting intrinsic apoptosis to treat disease.

Authors:  Kaiming Li; Mark F van Delft; Grant Dewson
Journal:  EMBO J       Date:  2021-05-26       Impact factor: 14.012

10.  The role of the mitochondrial protein VDAC1 in inflammatory bowel disease: a potential therapeutic target.

Authors:  Ankit Verma; Srinivas Pittala; Belal Alhozeel; Anna Shteinfer-Kuzmine; Ehud Ohana; Rajeev Gupta; Jay H Chung; Varda Shoshan-Barmatz
Journal:  Mol Ther       Date:  2021-07-02       Impact factor: 11.454

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