Literature DB >> 27733056

The elusive role of 5'-hydroxymethylcytosine.

Moshe Szyf1.   

Abstract

5'-hydroxymethylcytosine (5hmC) is a variant of the common covalent epigenetic modification of DNA 5'-methylcytosine (5mC). Although the presence of this modified base in mammalian DNA has been recognized for several decades, it has recently gained center stage as a suspected intermediate in enzymatic active demethylation of 5mC. The role of 5hmC remains elusive in spite of a large body of studies. It is proposed that 5hmC is a variant of the 5mC epigenetic signal and is involved in epigenetic regulation of gene function. Recent data support a role for 5hmC in the activation of lineage-specific enhancers.

Entities:  

Keywords:  DNA methylation; active demethylation; cellular differentiation; enhancers; global demethylation; hydroxymethylation; oxidases; stem cells

Mesh:

Substances:

Year:  2016        PMID: 27733056     DOI: 10.2217/epi-2016-0076

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  9 in total

1.  Evaluation of Post-Mortem Effects on Global Brain DNA Methylation and Hydroxymethylation.

Authors:  Louise K Sjöholm; Yusuf Ransome; Tomas J Ekström; Oskar Karlsson
Journal:  Basic Clin Pharmacol Toxicol       Date:  2017-11-13       Impact factor: 4.080

2.  Human Herpesvirus 6B Induces Hypomethylation on Chromosome 17p13.3, Correlating with Increased Gene Expression and Virus Integration.

Authors:  Elin Engdahl; Nicky Dunn; Pitt Niehusmann; Sarah Wideman; Peter Wipfler; Albert J Becker; Tomas J Ekström; Malin Almgren; Anna Fogdell-Hahn
Journal:  J Virol       Date:  2017-05-12       Impact factor: 5.103

3.  Genome-wide distribution of 5hmC in the dental pulp of mouse molars and incisors.

Authors:  Pujan Joshi; Anushree Vijaykumar; Badam Enkhmandakh; Mina Mina; Dong-Guk Shin; Dashzeveg Bayarsaihan
Journal:  J Biochem       Date:  2022-01-07       Impact factor: 3.241

4.  TET2 Protects against oxLDL-Induced HUVEC Dysfunction by Upregulating the CSE/H2S System.

Authors:  Juan Peng; Zhi-Han Tang; Zhong Ren; Bei He; Yun Zeng; Lu-Shan Liu; Zuo Wang; Dang-Heng Wei; Xi-Long Zheng; Zhi-Sheng Jiang
Journal:  Front Pharmacol       Date:  2017-07-26       Impact factor: 5.810

Review 5.  DNA Hydroxymethylation in Smoking-Associated Cancers.

Authors:  Ahmad Besaratinia; Amanda Caceres; Stella Tommasi
Journal:  Int J Mol Sci       Date:  2022-02-28       Impact factor: 5.923

6.  Global 5mC and 5hmC DNA Levels in Human Sperm Subpopulations with Differentially Protaminated Chromatin in Normo- and Oligoasthenozoospermic Males.

Authors:  Marta Olszewska; Oliwia Kordyl; Marzena Kamieniczna; Monika Fraczek; Piotr Jędrzejczak; Maciej Kurpisz
Journal:  Int J Mol Sci       Date:  2022-04-19       Impact factor: 5.923

7.  Selective demethylation of two CpG sites causes postnatal activation of the Dao gene and consequent removal of D-serine within the mouse cerebellum.

Authors:  Mariella Cuomo; Simona Keller; Daniela Punzo; Tommaso Nuzzo; Ornella Affinito; Lorena Coretti; Massimo Carella; Valeria de Rosa; Ermanno Florio; Francesca Boscia; Vittorio Enrico Avvedimento; Sergio Cocozza; Francesco Errico; Alessandro Usiello; Lorenzo Chiariotti
Journal:  Clin Epigenetics       Date:  2019-10-28       Impact factor: 6.551

Review 8.  The epigenetics of perinatal stress
.

Authors:  Moshe Szyf
Journal:  Dialogues Clin Neurosci       Date:  2019-12       Impact factor: 5.986

9.  DeepH&M: Estimating single-CpG hydroxymethylation and methylation levels from enrichment and restriction enzyme sequencing methods.

Authors:  Yu He; Hyo Sik Jang; Xiaoyun Xing; Daofeng Li; Michael J Vasek; Joseph D Dougherty; Ting Wang
Journal:  Sci Adv       Date:  2020-07-01       Impact factor: 14.136

  9 in total

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