Literature DB >> 27730650

The integrative role of cryo electron microscopy in molecular and cellular structural biology.

Igor Orlov1,2,3,4, Alexander G Myasnikov1,2,3,4, Leonid Andronov1,2,3,4, S Kundhavai Natchiar1,2,3,4, Heena Khatter1,2,3,4, Brice Beinsteiner1,2,3,4, Jean-François Ménétret1,2,3,4, Isabelle Hazemann1,2,3,4, Kareem Mohideen1,2,3,4, Karima Tazibt1,2,3,4, Rachel Tabaroni1,2,3,4, Hanna Kratzat1,2,3,4, Nadia Djabeur1,2,3,4, Tatiana Bruxelles1,2,3,4, Finaritra Raivoniaina1,2,3,4, Lorenza di Pompeo1,2,3,4, Morgan Torchy1,2,3,4, Isabelle Billas1,2,3,4, Alexandre Urzhumtsev1,2,3,4, Bruno P Klaholz1,2,3,4.   

Abstract

After gradually moving away from preparation methods prone to artefacts such as plastic embedding and negative staining for cell sections and single particles, the field of cryo electron microscopy (cryo-EM) is now heading off at unprecedented speed towards high-resolution analysis of biological objects of various sizes. This 'revolution in resolution' is happening largely thanks to new developments of new-generation cameras used for recording the images in the cryo electron microscope which have much increased sensitivity being based on complementary metal oxide semiconductor devices. Combined with advanced image processing and 3D reconstruction, the cryo-EM analysis of nucleoprotein complexes can provide unprecedented insights at molecular and atomic levels and address regulatory mechanisms in the cell. These advances reinforce the integrative role of cryo-EM in synergy with other methods such as X-ray crystallography, fluorescence imaging or focussed-ion beam milling as exemplified here by some recent studies from our laboratory on ribosomes, viruses, chromatin and nuclear receptors. Such multi-scale and multi-resolution approaches allow integrating molecular and cellular levels when applied to purified or in situ macromolecular complexes, thus illustrating the trend of the field towards cellular structural biology.
© 2016 The Authors. Biology of the Cell published by Wiley-VCH Verlag GmbH & Co. KGaA on behalf of Société Française des Microscopies and Société de Biologie Cellulaire de France.

Entities:  

Keywords:  Crystallography; Structural biology; Super-resolution microscopy; cryo electron microscopy; cryo electron tomography

Mesh:

Substances:

Year:  2016        PMID: 27730650     DOI: 10.1111/boc.201600042

Source DB:  PubMed          Journal:  Biol Cell        ISSN: 0248-4900            Impact factor:   4.458


  18 in total

1.  Affinity maturation of a portable Fab-RNA module for chaperone-assisted RNA crystallography.

Authors:  Deepak Koirala; Sandip A Shelke; Marcel Dupont; Stormy Ruiz; Saurja DasGupta; Lucas J Bailey; Steven A Benner; Joseph A Piccirilli
Journal:  Nucleic Acids Res       Date:  2018-03-16       Impact factor: 16.971

2.  Simulation-Based Methods for Model Building and Refinement in Cryoelectron Microscopy.

Authors:  Thomas Dodd; Chunli Yan; Ivaylo Ivanov
Journal:  J Chem Inf Model       Date:  2020-03-31       Impact factor: 4.956

Review 3.  Using single-vesicle technologies to unravel the heterogeneity of extracellular vesicles.

Authors:  Guillermo Bordanaba-Florit; Félix Royo; Sergei G Kruglik; Juan M Falcón-Pérez
Journal:  Nat Protoc       Date:  2021-06-16       Impact factor: 13.491

Review 4.  Crosslinking mass spectrometry: A link between structural biology and systems biology.

Authors:  Xiaoting Tang; Helisa H Wippel; Juan D Chavez; James E Bruce
Journal:  Protein Sci       Date:  2021-03-06       Impact factor: 6.725

5.  Exosomes purified from a single cell type have diverse morphology.

Authors:  Davide Zabeo; Aleksander Cvjetkovic; Cecilia Lässer; Martin Schorb; Jan Lötvall; Johanna L Höög
Journal:  J Extracell Vesicles       Date:  2017-06-20

6.  Editorial: Technical Advances in Cryo-Electron Microscopy.

Authors:  Angel Rivera-Calzada; Marta Carroni
Journal:  Front Mol Biosci       Date:  2019-08-22

7.  Special Issue: The Actin-Myosin Interaction in Muscle: Background and Overview.

Authors:  John Squire
Journal:  Int J Mol Sci       Date:  2019-11-14       Impact factor: 5.923

Review 8.  Visualizing the Role of 2'-OH rRNA Methylations in the Human Ribosome Structure.

Authors:  S Kundhavai Natchiar; Alexander G Myasnikov; Isabelle Hazemann; Bruno P Klaholz
Journal:  Biomolecules       Date:  2018-10-25

9.  Cryo-SOFI enabling low-dose super-resolution correlative light and electron cryo-microscopy.

Authors:  Felipe Moser; Vojtěch Pražák; Valerie Mordhorst; Débora M Andrade; Lindsay A Baker; Christoph Hagen; Kay Grünewald; Rainer Kaufmann
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-26       Impact factor: 11.205

Review 10.  Structural basis of light-harvesting in the photosystem II core complex.

Authors:  Frank Müh; Athina Zouni
Journal:  Protein Sci       Date:  2020-02-24       Impact factor: 6.725

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