| Literature DB >> 27724873 |
Pushpa Bhawan Mal1, Kauser Jabeen2, Joveria Farooqi1, Magnus Unemo3, Erum Khan1.
Abstract
BACKGROUND: Accurate detection of Neisseria gonorrhoeae antimicrobial resistance is essential for appropriate management and prevention of spread of infection in the community. In this study Calibrated Dichotomous Sensitivity (CDS) and Clinical Laboratory Standards Institute (CLSI) disc diffusion methods were compared with minimum inhibitory concentration (MIC) by Etest in Neisseria gonorrhoeae isolates from Karachi, Pakistan. CDS and CLSI disc diffusion techniques, and Etest for ceftriaxone, penicillin G, spectinomycin and ciprofloxacin against 100 isolates from years 2012-2014 were performed. Due to lack of CLSI breakpoints for azithromycin, it was interpreted using cut-offs from British Society of Antimicrobial Chemotherapy (BSAC). Due to lack of low concentration tetracycline discs, tetracycline was tested with CLSI disc diffusion and Etest only. Comparisons were based on the identified susceptibility, intermediate susceptibility and resistance (SIR) categories using the different methods. Complete percent agreement was percentage agreement achieved when test and reference method had identical SIR-category. Essential percent agreement was percentage agreement when minor discrepancies were disregarded.Entities:
Keywords: Antimicrobial surveillance; CDS; CLSI; Disc diffusion; Etest; Neisseria gonorrhoeae
Mesh:
Substances:
Year: 2016 PMID: 27724873 PMCID: PMC5057452 DOI: 10.1186/s12866-016-0707-6
Source DB: PubMed Journal: BMC Microbiol ISSN: 1471-2180 Impact factor: 3.605
Mean annular radius and expected ranges of WHO Neisseria gonorrhoeae reference strains (F, G, K, L, M, N, O and P)
| Methods | Antibiotics tested | F | G | K | L | M | N | O | P | |
|---|---|---|---|---|---|---|---|---|---|---|
| CDS | Penicillin G | Mean annular radius (range) | 13.2 (12–15) | 5.5 (3–7) | 00 | 00 | 00 | 00 | 00 | 6 (5–7) |
| Expected result | >9 (S) | 3–9 (I) | <3 (R) | <3 (R) | <3 (R) | <3 (R) | <3 (R) | 3–9 (I) | ||
| β-lactamase production | No | No | No | No | Yes | Yes | Yes | No | ||
| Expected result | No | No | No | No | Yes | Yes | Yes | No | ||
| Ciprofloxacin | Mean annular radius (range) | 15 (14–17) | 7.7 (7–9) | 00 | 00 | 3.2 (02–4) | 00 | 13.5 (12–15) | 14.2 (13–16) | |
| Expected result | ≥11 (S) | 6–10 (I) | <6 (R) | <6 (R) | <6 (R) | <6 (R) | ≥11 (S) | ≥11 (S) | ||
| Spectinomycin | Mean annular radius (range) | 11 (10–11) | 10.2 (9–11) | 16 (15–18) | 9.5 (8–11) | 11 (9–13) | 13.5 (10–17) | 00 | 13 (11–15) | |
| Expected result | ≥6 (S) | ≥6 (S) | ≥6 (S) | ≥6 (S) | ≥6 (S) | ≥6 (S) | <6 (R) | ≥6 (S) | ||
| Azithromycin | Mean annular radius (range) | 12.5 (10–15) | 14 (12–16) | 13.5 (12–15) | 11 (9–13) | 12 (9–15) | 11.5 (10–13) | 13 (12–15) | 1.5 (0–4) | |
| Expected result | ≥8 (S) | ≥8 (S) | ≥8 (S) | ≥8 (S) | ≥8 (S) | ≥8 (S) | ≥8 (S) | <8 (R) | ||
| Ceftriaxone | Mean annular radius (range) | 14.2 (12–16) | 14.7 (14–16) | 6.7 (6–8) | 5.5 (5–7) | 13 (12–15) | 13.2 (12–15) | 13.2 (13–15) | 13.7 (13–15) | |
| Expected result | ≥10 (S) | ≥10 (S) | 5–9 (DS) | 5–9 (DS) | ≥10 (S) | ≥10 (S) | ≥10 (S) | ≥10 (S) | ||
| MIC by Etest | Ceftriaxonea | Etest MIC ranges | <0.002 | 0.004–0.008 | 0.064–0.125 | 0.125–0.25 | 0.008–0.016 | 0.002–0.004 | 0.016–0.032 | 0.004–0.008 |
| Expected result | <0.002 (S) | 0.004–0.016 (S) | 0.032–0.125 (DS) | 0.064–0.25 (DS) | 0.008–0.032 (S) | 0.002–0.008 (S) | 0.016–0.064 (S) | 0.002–0.008 (S) | ||
aMICs for control strains was performed only for ceftriaxone. DS Decreased susceptibility, S Sensitive, I intermediate, R resistant
Antimicrobial susceptibility results of Neisseria gonorrhoeae isolates by CDS/CLSI disc diffusion and MIC by Etest (n = 100)
| Methods | Penicillin G % | Ciprofloxacin % | Ceftriaxone % | Tetracycline % | Spectinomycin % | Azithromycin % | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| S | I | R | S | I | R | S | I | R | S | I | R | S | I | R | S | I | R | |
| Etest MIC | 08 | 49 | 43 | 00 | 14 | 86 | 100 | 00 | 00 | 12 | 37 | 51 | 100 | 00 | 00 | 99 | 00 | 01 |
| CLSI/BSACa MIC break points (μg/ml) | ≤0.06 | 0.12-1 | ≥2 | ≤0.06 | 0.12-0.5 | ≥1 | ≤0.25 | - | - | ≤0.25 | 0.5–1 | ≥2 | ≤32 | 64 | ≥128 | ≤0.25 | 0.5 | ≥0.5 |
| CDS disc diffusion | 10 | 13 | 77 | 00 | 20 | 80 | 100 | 00 | 00 | NP | NP | NP | 100 | 00 | 00 | 99 | 00 | 01 |
| CDS annular radius break points (mm) | >9 | 3-9 | <3 | ≥11 | 6-10 | <6 | ≥10 | - | 5-9 | NP | NP | NP | ≥6 | - | <6 | ≥8 | - | <8 |
| CLSI disc diffusion | 04 | 34 | 62 | 00 | 04 | 96 | 100 | 00 | 00 | 03 | 40 | 57 | 100 | 00 | 00 | 99 | 00 | 01 |
| CLSI/BSACa zone diameter break points (mm) | ≥47 | 27-46 | ≤26 | >41 | 28-40 | ≤27 | ≥35 | - | - | ≥38 | 31-37 | <30 | ≥18 | 15-17 | ≤4 | ≥28 | - | ≤27 |
S sensitive, I intermediate, R resistant
NP not performed
aBSAC breakpoints were used for Azithromycin
Comparison of discrepancies and agreement between the CDS, CLSI and Etest method for 100 Neisseria gonorrhoeae isolates
| Antibiotics | No. of discrepancies | % Agreement | Kappa value | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Minor | Major | Very major | Complete | Essential | ||||||||
| Methods | CDS | CLSI | CDS | CLSI | CDS | CLSI | CDS | CLSI | CDS | CLSI | CLSI | CDS |
| Ceftriaxone | 00 | 00 | 00 | 00 | 00 | 00 | 100 | 100 | 100 | 100 | - | - |
| Spectinomycin | 00 | 00 | 00 | 00 | 00 | 00 | 100 | 100 | 100 | 100 | - | - |
| Penicillin G | 40 | 25 | 00 | 00 | 00 | 00 | 60 | 75 | 100 | 100 | 0.5652 | 0.3435 |
| Ciprofloxacin | 10 | 14 | 00 | 00 | 00 | 00 | 90 | 86 | 100 | 100 | 0.0990 | 0.6718 |
| Tetracycline | -a | 37 | -a | 01 | -a | 00 | -a | 62 | -a | 99 | 0.2963 | -a |
| Overall | 50 | 76 | 00 | 01 | 00 | 00 | 50 | 23 | 100 | 99 | - | - |
aNot tested
Minor error: test result showed resistant or susceptible and reference results showed intermediate or test results showed intermediate and reference results showed resistant or susceptible
Major error: test result showed susceptible and reference results showed resistant
Very major error: test result showed resistant and reference results susceptible
Complete percent agreement value was percentage agreement achieved when the test and reference method had identical SIR-category of result
Essential percent agreement value was percentage agreement obtained between the reference and test method when minor discrepancies were disregarded
SIR agreement rate of Neisseria gonorrhoeae isolates by CDS/CLSI disc diffusion against MIC by Etest (All 100 isolates were sensitive to ceftriaxone and spectinomycin by all three methods therefore are not shown in this table)
| Category | Etest | Complete agreement | ||||
|---|---|---|---|---|---|---|
| Concordant results | Discordant Results | |||||
| S | I | R | ||||
| CDS | ||||||
| Penicillin G | S | 06 | 04 | 00 | 60 | 40 |
| I | 02 | 11 | 00 | |||
| R | 00 | 34 | 43 | |||
| Ciprofloxacin | S | 00 | 00 | 00 | 90 | 10 |
| I | 00 | 12 | 08 | |||
| R | 00 | 02 | 78 | |||
| Azithromycin | S | 99 | 00 | 00 | 100 | 00 |
| I | 00 | 00 | 00 | |||
| R | 00 | 00 | 01 | |||
| CLSI | ||||||
| Penicillin G | S | 04 | 00 | 00 | 75 | 25 |
| I | 04 | 29 | 01 | |||
| R | 00 | 20 | 42 | |||
| Ciprofloxacin | S | 00 | 00 | 00 | 86 | 14 |
| I | 00 | 02 | 02 | |||
| R | 00 | 12 | 84 | |||
| Tetracycline | S | 01 | 02 | 00 | 62 | 37 |
| I | 10 | 20 | 10 | |||
| R | 01 | 15 | 41 | |||
| Azithromycina | S | 99 | 00 | 00 | 100 | 00 |
| I | 00 | 00 | 00 | |||
| R | 00 | 00 | 01 | |||
SIR: Sensitive, intermediate, resistant
Tetracycline was tested with CLSI method only
aBSAC break points were used for Azithromycin