Literature DB >> 27722677

Tuning the nature and stability of self-assemblies formed by ester benzene 1,3,5-tricarboxamides: the crucial role played by the substituents.

Alaric Desmarchelier1, Bruno Giordano Alvarenga2, Xavier Caumes1, Ludovic Dubreucq1, Claire Troufflard1, Martine Tessier1, Nicolas Vanthuyne3, Julien Idé4, Thomas Maistriaux4, David Beljonne4, Patrick Brocorens4, Roberto Lazzaroni4, Matthieu Raynal1, Laurent Bouteiller1.   

Abstract

As the benzene 1,3,5-tricarboxamide (BTA) moiety is commonly used as the central assembling unit for the construction of functionalized supramolecular architectures, strategies to tailor the nature and stability of BTA assemblies are needed. The assembly properties of a library of structurally simple BTAs derived from amino dodecyl esters (ester BTAs, 13 members) have been studied, either in the bulk or in cyclohexane solutions, by means of a series of analytical methods (NMR, DSC, POM, FT-IR, UV-Vis, CD, ITC, high-sensitivity DSC, SANS). Two types of hydrogen-bonded species have been identified and characterized: the expected amide-bonded helical rods (or stacks) that are structurally similar to those formed by BTAs with simple alkyl side chains (alkyl BTAs), and ester-bonded dimers in which the BTAs are connected by means of hydrogen bonds linking the amide N-H and the ester C[double bond, length as m-dash]O. MM/MD calculations coupled with simulations of CD spectra allow for the precise determination of the molecular arrangement and of the hydrogen bond pattern of these dimers. Our study points out the crucial influence of the substituent attached on the amino-ester α-carbon on the relative stability of the rod-like versus dimeric assemblies. By varying this substituent, one can precisely tune the nature of the dominant hydrogen-bonded species (stacks or dimers) in the neat compounds and in cyclohexane over a wide range of temperatures and concentrations. In the neat BTAs, stacks are stable up to 213 °C and dimers above 180 °C whilst in cyclohexane stacks form at c* > 3 × 10-5 M at 20 °C and dimers are stable up to 80 °C at 7 × 10-6 M. Ester BTAs that assemble into stacks form a liquid-crystalline phase and yield gels or viscous solutions in cyclohexane, demonstrating the importance of controlling the structure of these assemblies. Our systematic study of these structurally similar ester BTAs also allows for a better understanding of how a single atom or moiety can impact the nature and stability of BTA aggregates, which is of importance for the future development of functionalized BTA supramolecular polymers.

Entities:  

Year:  2016        PMID: 27722677     DOI: 10.1039/c6sm01601d

Source DB:  PubMed          Journal:  Soft Matter        ISSN: 1744-683X            Impact factor:   3.679


  7 in total

1.  Cooperativity Scale: A Structure-Mechanism Correlation in the Self-Assembly of Benzene-1,3,5-tricarboxamides.

Authors:  Chidambar Kulkarni; E W Meijer; Anja R A Palmans
Journal:  Acc Chem Res       Date:  2017-07-10       Impact factor: 22.384

2.  Supramolecular Copolymers: Structure and Composition Revealed by Theoretical Modeling.

Authors:  Anindita Das; Ghislaine Vantomme; Albert J Markvoort; Huub M M Ten Eikelder; Miguel Garcia-Iglesias; Anja R A Palmans; E W Meijer
Journal:  J Am Chem Soc       Date:  2017-05-16       Impact factor: 15.419

Review 3.  Molecular simulations of self-assembling bio-inspired supramolecular systems and their connection to experiments.

Authors:  Pim W J M Frederix; Ilias Patmanidis; Siewert J Marrink
Journal:  Chem Soc Rev       Date:  2018-05-21       Impact factor: 54.564

4.  Tuning the Length of Cooperative Supramolecular Polymers under Thermodynamic Control.

Authors:  Ghislaine Vantomme; Gijs M Ter Huurne; Chidambar Kulkarni; Huub M M Ten Eikelder; Albert J Markvoort; Anja R A Palmans; E W Meijer
Journal:  J Am Chem Soc       Date:  2019-11-04       Impact factor: 15.419

5.  Elucidating the Supramolecular Copolymerization of N- and C-Centered Benzene-1,3,5-Tricarboxamides: The Role of Parallel and Antiparallel Packing of Amide Groups in the Copolymer Microstructure.

Authors:  Lafayette N J de Windt; Zulema Fernández; Manuel Fernández-Míguez; Félix Freire; Anja R A Palmans
Journal:  Chemistry       Date:  2021-12-02       Impact factor: 5.020

6.  Structural and Spectroscopic Properties of Assemblies of Self-Replicating Peptide Macrocycles.

Authors:  Pim W J M Frederix; Julien Idé; Yigit Altay; Gaël Schaeffer; Mathieu Surin; David Beljonne; Anna S Bondarenko; Thomas L C Jansen; Sijbren Otto; Siewert J Marrink
Journal:  ACS Nano       Date:  2017-07-21       Impact factor: 15.881

7.  Anti-cooperative Self-Assembly with Maintained Emission Regulated by Conformational and Steric Effects.

Authors:  Ingo Helmers; Muhammad Saddam Hossain; Nils Bäumer; Paul Wesarg; Bartolome Soberats; Linda S Shimizu; Gustavo Fernández
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-02       Impact factor: 16.823

  7 in total

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