Literature DB >> 27721647

Optical Coherence Tomography for Brain Imaging and Developmental Biology.

Jing Men1, Yongyang Huang1, Jitendra Solanki1, Xianxu Zeng1, Aneesh Alex1, Jason Jerwick1, Zhan Zhang2, Rudolph E Tanzi3, Airong Li3, Chao Zhou1.   

Abstract

Optical coherence tomography (OCT) is a promising research tool for brain imaging and developmental biology. Serving as a three-dimensional optical biopsy technique, OCT provides volumetric reconstruction of brain tissues and embryonic structures with micrometer resolution and video rate imaging speed. Functional OCT enables label-free monitoring of hemodynamic and metabolic changes in the brain in vitro and in vivo in animal models. Due to its non-invasiveness nature, OCT enables longitudinal imaging of developing specimens in vivo without potential damage from surgical operation, tissue fixation and processing, and staining with exogenous contrast agents. In this paper, various OCT applications in brain imaging and developmental biology are reviewed, with a particular focus on imaging heart development. In addition, we report findings on the effects of a circadian gene (Clock) and high-fat-diet on heart development in Drosophila melanogaster. These findings contribute to our understanding of the fundamental mechanisms connecting circadian genes and obesity to heart development and cardiac diseases.

Entities:  

Keywords:  Biological systems; Biomedical optical imaging; Brain; Cardiovascular system and Optical tomography

Year:  2015        PMID: 27721647      PMCID: PMC5049888          DOI: 10.1109/JSTQE.2015.2513667

Source DB:  PubMed          Journal:  IEEE J Sel Top Quantum Electron        ISSN: 1077-260X            Impact factor:   4.544


  210 in total

1.  Multimodal optical imaging system for in vivo investigation of cerebral oxygen delivery and energy metabolism.

Authors:  Mohammad A Yaseen; Vivek J Srinivasan; Iwona Gorczynska; James G Fujimoto; David A Boas; Sava Sakadžić
Journal:  Biomed Opt Express       Date:  2015-11-20       Impact factor: 3.732

2.  Three-dimensional optical coherence tomography of the embryonic murine cardiovascular system.

Authors:  Wei Luo; Daniel L Marks; Tyler S Ralston; Stephen A Boppart
Journal:  J Biomed Opt       Date:  2006 Mar-Apr       Impact factor: 3.170

3.  Extended focus depth for Fourier domain optical coherence microscopy.

Authors:  R A Leitgeb; M Villiger; A H Bachmann; L Steinmann; T Lasser
Journal:  Opt Lett       Date:  2006-08-15       Impact factor: 3.776

4.  Megahertz OCT for ultrawide-field retinal imaging with a 1050 nm Fourier domain mode-locked laser.

Authors:  Thomas Klein; Wolfgang Wieser; Christoph M Eigenwillig; Benjamin R Biedermann; Robert Huber
Journal:  Opt Express       Date:  2011-02-14       Impact factor: 3.894

5.  Optical coherence tomography imaging for analysis of follicular development in ovarian tissue.

Authors:  Yuuki Watanabe; Kei Takakura; Reiko Kurotani; Hiroyuki Abe
Journal:  Appl Opt       Date:  2015-07-01       Impact factor: 1.980

Review 6.  Optical properties of biological tissues: a review.

Authors:  Steven L Jacques
Journal:  Phys Med Biol       Date:  2013-05-10       Impact factor: 3.609

7.  Three-dimensional correction of conduction velocity in the embryonic heart using integrated optical mapping and optical coherence tomography.

Authors:  Pei Ma; Yves T Wang; Shi Gu; Michiko Watanabe; Michael W Jenkins; Andrew M Rollins
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

8.  Ultrahigh sensitive optical microangiography for in vivo imaging of microcirculations within human skin tissue beds.

Authors:  Lin An; Jia Qin; Ruikang K Wang
Journal:  Opt Express       Date:  2010-04-12       Impact factor: 3.894

9.  Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.

Authors:  Hans-Ulrich Dodt; Ulrich Leischner; Anja Schierloh; Nina Jährling; Christoph Peter Mauch; Katrin Deininger; Jan Michael Deussing; Matthias Eder; Walter Zieglgänsberger; Klaus Becker
Journal:  Nat Methods       Date:  2007-03-25       Impact factor: 28.547

10.  Dual-beam Fourier domain optical Doppler tomography of zebrafish.

Authors:  Nicusor V Iftimia; Daniel X Hammer; R D Ferguson; Mircea Mujat; Danthu Vu; Anthony A Ferrante
Journal:  Opt Express       Date:  2008-09-01       Impact factor: 3.894

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  17 in total

Review 1.  Review of the potential of optical technologies for cancer diagnosis in neurosurgery: a step toward intraoperative neurophotonics.

Authors:  Fartash Vasefi; Nicholas MacKinnon; Daniel L Farkas; Babak Kateb
Journal:  Neurophotonics       Date:  2016-12-26       Impact factor: 3.593

2.  The State of the NIH BRAIN Initiative.

Authors:  Walter Koroshetz; Joshua Gordon; Amy Adams; Andrea Beckel-Mitchener; James Churchill; Gregory Farber; Michelle Freund; Jim Gnadt; Nina S Hsu; Nicholas Langhals; Sarah Lisanby; Guoying Liu; Grace C Y Peng; Khara Ramos; Michael Steinmetz; Edmund Talley; Samantha White
Journal:  J Neurosci       Date:  2018-06-19       Impact factor: 6.167

3.  Embryonic aortic arch hemodynamics are a functional biomarker for ethanol-induced congenital heart defects [Invited].

Authors:  Lindsy M Peterson; Shi Gu; Ganga Karunamuni; Michael W Jenkins; Michiko Watanabe; Andrew M Rollins
Journal:  Biomed Opt Express       Date:  2017-02-24       Impact factor: 3.732

4.  Drosophila Preparation and Longitudinal Imaging of Heart Function In Vivo Using Optical Coherence Microscopy (OCM).

Authors:  Jing Men; Jason Jerwick; Penghe Wu; Mingming Chen; Aneesh Alex; Yutao Ma; Rudolph E Tanzi; Airong Li; Chao Zhou
Journal:  J Vis Exp       Date:  2016-12-12       Impact factor: 1.355

Review 5.  Optical coherence tomography for embryonic imaging: a review.

Authors:  Raksha Raghunathan; Manmohan Singh; Mary E Dickinson; Kirill V Larin
Journal:  J Biomed Opt       Date:  2016-05-01       Impact factor: 3.170

6.  FlyNet 2.0: drosophila heart 3D (2D + time) segmentation in optical coherence microscopy images using a convolutional long short-term memory neural network.

Authors:  Zhao Dong; Jing Men; Zhiwen Yang; Jason Jerwick; Airong Li; Rudolph E Tanzi; Chao Zhou
Journal:  Biomed Opt Express       Date:  2020-02-21       Impact factor: 3.732

7.  Comparison and combination of rotational imaging optical coherence tomography and selective plane illumination microscopy for embryonic study.

Authors:  Chen Wu; Henry Le; Shihao Ran; Manmohan Singh; Irina V Larina; David Mayerich; Mary E Dickinson; Kirill V Larin
Journal:  Biomed Opt Express       Date:  2017-09-22       Impact factor: 3.732

8.  Evaluating the effects of maternal alcohol consumption on murine fetal brain vasculature using optical coherence tomography.

Authors:  Raksha Raghunathan; Chen Wu; Manmohan Singh; Chih-Hao Liu; Rajesh C Miranda; Kirill V Larin
Journal:  J Biophotonics       Date:  2018-02-26       Impact factor: 3.207

Review 9.  Label-free optical imaging in developmental biology [Invited].

Authors:  Shang Wang; Irina V Larina; Kirill V Larin
Journal:  Biomed Opt Express       Date:  2020-03-13       Impact factor: 3.732

10.  Dynamic imaging and quantitative analysis of cranial neural tube closure in the mouse embryo using optical coherence tomography.

Authors:  Shang Wang; Monica D Garcia; Andrew L Lopez; Paul A Overbeek; Kirill V Larin; Irina V Larina
Journal:  Biomed Opt Express       Date:  2016-12-21       Impact factor: 3.732

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