| Literature DB >> 27718363 |
Jaymin J Kathiriya1, Ravi Ramesh Pathak1, Alexandr Bezginov2, Bin Xue3, Vladimir N Uversky4, Elisabeth R M Tillier2, Vrushank Davé5.
Abstract
Therapeutic protein kinase inhibitors are designed on the basis of kinase structures. Here, we define intrinsically disordered regions (IDRs) in structurally hybrid kinases. We reveal that 65% of kinases have an IDR adjacent to their kinase domain (KD). These IDRs are evolutionarily more conserved than IDRs distant to KDs. Strikingly, 36 kinases have adjacent IDRs extending into their KDs, defining a unique structural and functional subset of the kinome. Functional network analysis of this subset of the kinome uncovered FAK1 as topologically the most connected hub kinase. We identify that KD-flanking IDR of FAK1 is more conserved and undergoes more post-translational modifications than other IDRs. It preferentially interacts with proteins regulating scaffolding and kinase activity, which contribute to cytoskeletal remodeling. In summary, spatially and evolutionarily conserved IDRs in kinases may influence their functions, which can be exploited for targeted therapies in diseases including those that involve aberrant cytoskeletal remodeling. Copyright ÂEntities:
Keywords: Evolution of kinases; FAK1 signaling; Hub proteins; Intrinsic disorder in kinases; Network medicine; Protein-protein interaction networks
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Year: 2016 PMID: 27718363 PMCID: PMC5127739 DOI: 10.1016/j.bbapap.2016.10.002
Source DB: PubMed Journal: Biochim Biophys Acta Proteins Proteom ISSN: 1570-9639 Impact factor: 3.036