Literature DB >> 27714610

Ribosomal Synthesis of Thioether-Bridged Bicyclic Peptides.

Nina Bionda1, Rudi Fasan2.   

Abstract

Many biologically active peptides found in nature exhibit a bicyclic structure wherein a head-to-tail cyclic backbone is further constrained by an intramolecular linkage connecting two side chains of the peptide. Accordingly, methods to access macrocyclic peptides sharing this overall topology could be of significant value toward the discovery of new functional entities and bioactive compounds. With this goal in mind, we recently developed a strategy for enabling the biosynthesis of thioether-bridged bicyclic peptides in living bacterial cells. This method involves a split intein-catalyzed head-to-tail cyclization of a ribosomally produced precursor peptide, combined with inter-sidechain cross-linking through a genetically encoded cysteine-reactive amino acid. This approach can be applied to direct the formation of structurally diverse bicyclic peptides with high efficiency and selectivity in living Escherichia coli cells and provides a platform for the generation of combinatorial libraries of genetically encoded bicyclic peptides for screening purposes.

Entities:  

Keywords:  Amber stop codon suppression; Bicyclic peptides; Split intein; Thioether-linked peptide macrocycles; Unnatural amino acid

Mesh:

Substances:

Year:  2017        PMID: 27714610      PMCID: PMC5777217          DOI: 10.1007/978-1-4939-6451-2_5

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  24 in total

1.  Production of cyclic peptides and proteins in vivo.

Authors:  C P Scott; E Abel-Santos; M Wall; D C Wahnon; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

Review 2.  Ribosomal production and in vitro selection of natural product-like peptidomimetics: the FIT and RaPID systems.

Authors:  Christopher J Hipolito; Hiroaki Suga
Journal:  Curr Opin Chem Biol       Date:  2012-03-06       Impact factor: 8.822

3.  Intein-based biosynthetic incorporation of unlabeled protein tags into isotopically labeled proteins for NMR studies.

Authors:  Sara Züger; Hideo Iwai
Journal:  Nat Biotechnol       Date:  2005-05-22       Impact factor: 54.908

Review 4.  Design, synthesis, and diversification of ribosomally derived peptide macrocycles.

Authors:  John R Frost; Jessica M Smith; Rudi Fasan
Journal:  Curr Opin Struct Biol       Date:  2013-07-12       Impact factor: 6.809

Review 5.  The exploration of macrocycles for drug discovery--an underexploited structural class.

Authors:  Edward M Driggers; Stephen P Hale; Jinbo Lee; Nicholas K Terrett
Journal:  Nat Rev Drug Discov       Date:  2008-07       Impact factor: 84.694

6.  Ribosomal Synthesis of Natural-Product-Like Bicyclic Peptides in Escherichia coli.

Authors:  Nina Bionda; Rudi Fasan
Journal:  Chembiochem       Date:  2015-08-06       Impact factor: 3.164

Review 7.  Polycyclic peptide therapeutics.

Authors:  Vanessa Baeriswyl; Christian Heinis
Journal:  ChemMedChem       Date:  2013-01-25       Impact factor: 3.466

Review 8.  Peptides come round: using SICLOPPS libraries for early stage drug discovery.

Authors:  Katherine R Lennard; Ali Tavassoli
Journal:  Chemistry       Date:  2014-07-09       Impact factor: 5.236

9.  A systematic method for identifying small-molecule modulators of protein-protein interactions.

Authors:  Alexander R Horswill; Sergey N Savinov; Stephen J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-21       Impact factor: 11.205

10.  Binding to protein targets of peptidic leads discovered by phage display: crystal structures of streptavidin-bound linear and cyclic peptide ligands containing the HPQ sequence.

Authors:  B A Katz
Journal:  Biochemistry       Date:  1995-11-28       Impact factor: 3.162

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  3 in total

1.  Design and Evolution of a Macrocyclic Peptide Inhibitor of the Sonic Hedgehog/Patched Interaction.

Authors:  Andrew E Owens; Ivan de Paola; William A Hansen; Yi-Wen Liu; Sagar D Khare; Rudi Fasan
Journal:  J Am Chem Soc       Date:  2017-08-30       Impact factor: 15.419

Review 2.  A Genetically Encoded, Phage-Displayed Cyclic-Peptide Library.

Authors:  Xiaoshan Shayna Wang; Peng-Hsun Chase Chen; J Trae Hampton; Jeffery M Tharp; Catrina A Reed; Sukant K Das; Duen-Shian Wang; Hamed S Hayatshahi; Yang Shen; Jin Liu; Wenshe Ray Liu
Journal:  Angew Chem Int Ed Engl       Date:  2019-09-09       Impact factor: 15.336

3.  The Biosynthesis of Heterophyllin B in Pseudostellaria heterophylla From prePhHB-Encoded Precursor.

Authors:  Wei Zheng; Tao Zhou; Jun Li; Weike Jiang; Jinqiang Zhang; Chenghong Xiao; Dequn Wei; Changgui Yang; Rong Xu; Anhui Gong; Chen Zhang; Yan Bi
Journal:  Front Plant Sci       Date:  2019-10-17       Impact factor: 5.753

  3 in total

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