Literature DB >> 27713424

5-Hydroxymethylcytosine is an independent predictor of survival in malignant melanoma.

Gerald Saldanha1,2, Kushal Joshi1, Kathryn Lawes2, Mark Bamford2, Farhaan Moosa1, Kah Wee Teo1, J Howard Pringle1.   

Abstract

Outcomes for melanoma patients vary within cancer stage. Prognostic biomarkers are potential adjuncts to provide more precise prognostic information. Simple, low-cost biomarker assays, such as those based on immunohistochemistry, have strong translational potential. 5-hydroxymethylcytosine (5 hmC) shows prognostic potential in melanoma but prior studies were small. We, therefore, analysed 5 hmC in a retrospective cohort to provide external validation of its prognostic value. Two hundred primary melanomas were evaluated for 5 hmC expression using immunohistochemistry. The primary objective was to assess the effect on overall survival while controlling for important confounders. Univariable and multivariable analyses were performed. REMARK guidelines were followed. The 5 hmC immunohistochemistry scoring showed very strong inter-observer agreement (ICC 0.88) and expression was significantly related to age, site, Breslow thickness, ulceration, mitotic rate, and stage. Kaplan-Meier analysis showed 5 hmC was associated with metastasis-free, melanoma-specific, and overall survival, P<0.0001 for each. In univariable Cox proportional hazards models, 5 hmC hazard ratios were significant and remained so in a multivariable model. A two-step cox model was created using stage and 5 hmC, as stage is the gold standard for clinical practice. The addition of 5 hmC produced significant improvement in the model and 5 hmC and stage were independent significant predictors. This is the largest study of the prognostic value of 5 hmC immunohistochemistry in melanoma. The 5 hmC scoring was easily and reproducibly performed and it was an independent predictor of metastasis-free survival, melanoma-specific survival, and overall survival. This work supports further development of 5 hmC as a prognostic biomarker and suggests that it could add more precision to American Joint Committee on Cancer staging.

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Year:  2016        PMID: 27713424      PMCID: PMC6176904          DOI: 10.1038/modpathol.2016.159

Source DB:  PubMed          Journal:  Mod Pathol        ISSN: 0893-3952            Impact factor:   7.842


  28 in total

Review 1.  Prognostic tissue markers in melanoma.

Authors:  David A Moore; J Howard Pringle; Gerald S Saldanha
Journal:  Histopathology       Date:  2011-08-22       Impact factor: 5.087

2.  Biomarkers: the useful and the not so useful--an assessment of molecular prognostic markers for cutaneous melanoma.

Authors:  Bonnie E Gould Rothberg; David L Rimm
Journal:  J Invest Dermatol       Date:  2010-06-17       Impact factor: 8.551

3.  Loss of 5-hydroxymethylcytosine and ten-eleven translocation 2 protein expression in malignant melanoma.

Authors:  Thilo Gambichler; Michael Sand; Marina Skrygan
Journal:  Melanoma Res       Date:  2013-06       Impact factor: 3.599

4.  Prediction of survival in patients with thin melanoma: results from a multi-institution study.

Authors:  Andrea Maurichi; Rosalba Miceli; Tiziana Camerini; Luigi Mariani; Roberto Patuzzo; Roberta Ruggeri; Gianfranco Gallino; Elena Tolomio; Gabrina Tragni; Barbara Valeri; Andrea Anichini; Roberta Mortarini; Daniele Moglia; Giovanni Pellacani; Sara Bassoli; Caterina Longo; Pietro Quaglino; Nicola Pimpinelli; Lorenzo Borgognoni; Daniele Bergamaschi; Catherine Harwood; Odysseas Zoras; Mario Santinami
Journal:  J Clin Oncol       Date:  2014-07-07       Impact factor: 44.544

Review 5.  Tissue biomarkers for prognosis in cutaneous melanoma: a systematic review and meta-analysis.

Authors:  Bonnie E Gould Rothberg; Michael B Bracken; David L Rimm
Journal:  J Natl Cancer Inst       Date:  2009-03-24       Impact factor: 13.506

6.  Diagnostic utility of 5-hydroxymethylcytosine immunohistochemistry in melanocytic proliferations.

Authors:  Nemanja Rodić; John Zampella; Reema Sharma; Kathleen H Burns; Janis M Taube
Journal:  J Cutan Pathol       Date:  2015-09-02       Impact factor: 1.587

7.  Identification of a melanoma susceptibility locus and somatic mutation in TET2.

Authors:  Fengju Song; Christopher I Amos; Jeffrey E Lee; Christine G Lian; Shenying Fang; Hongliang Liu; Stuart MacGregor; Mark M Iles; Matthew H Law; Neal I Lindeman; Grant W Montgomery; David L Duffy; Anne E Cust; Mark A Jenkins; David C Whiteman; Richard F Kefford; Graham G Giles; Bruce K Armstrong; Joanne F Aitken; John L Hopper; Kevin M Brown; Nicholas G Martin; Graham J Mann; D Timothy Bishop; Julia A Newton Bishop; Peter Kraft; Abrar A Qureshi; Peter A Kanetsky; Nicholas K Hayward; David J Hunter; Qingyi Wei; Jiali Han
Journal:  Carcinogenesis       Date:  2014-06-30       Impact factor: 4.944

8.  Loss of 5-hydroxymethylcytosine correlates with increasing morphologic dysplasia in melanocytic tumors.

Authors:  Allison R Larson; Karen A Dresser; Qian Zhan; Cecilia Lezcano; Bruce A Woda; Benafsha Yosufi; John F Thompson; Richard A Scolyer; Martin C Mihm; Yujiang G Shi; George F Murphy; Christine Guo Lian
Journal:  Mod Pathol       Date:  2014-01-03       Impact factor: 7.842

9.  Loss of the epigenetic mark, 5-Hydroxymethylcytosine, correlates with small cell/nevoid subpopulations and assists in microstaging of human melanoma.

Authors:  Jonathan J Lee; Martin Cook; Martin C Mihm; Shuyun Xu; Qian Zhan; Thomas J Wang; George F Murphy; Christine G Lian
Journal:  Oncotarget       Date:  2015-11-10

10.  Targeted next-generation sequencing reveals high frequency of mutations in epigenetic regulators across treatment-naïve patient melanomas.

Authors:  Jonathan J Lee; Lynette M Sholl; Neal I Lindeman; Scott R Granter; Alvaro C Laga; Priyanka Shivdasani; Gary Chin; Jason J Luke; Patrick A Ott; F Stephen Hodi; Martin C Mihm; Jennifer Y Lin; Andrew E Werchniak; Harley A Haynes; Nancy Bailey; Robert Liu; George F Murphy; Christine G Lian
Journal:  Clin Epigenetics       Date:  2015-06-09       Impact factor: 6.551

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  5 in total

Review 1.  Ten-eleven translocase: key regulator of the methylation landscape in cancer.

Authors:  Jyoti Shekhawat; Kavya Gauba; Shruti Gupta; Bikram Choudhury; Purvi Purohit; Praveen Sharma; Mithu Banerjee
Journal:  J Cancer Res Clin Oncol       Date:  2021-04-28       Impact factor: 4.553

2.  Loss of the Epigenetic Mark 5-hmC in Psoriasis: Implications for Epidermal Stem Cell Dysregulation.

Authors:  Feng Li; Christine W Yuan; Shuyun Xu; Tingjian Zu; Yvon Woappi; Catherine A A Lee; Phammela Abarzua; Michael Wells; Matthew R Ramsey; Natasha Y Frank; Xunwei Wu; Anna Mandinova; Markus H Frank; Christine G Lian; George F Murphy
Journal:  J Invest Dermatol       Date:  2019-12-11       Impact factor: 8.551

3.  5-Hydroxymethylcytosine Profiles Are Prognostic of Outcome in Neuroblastoma and Reveal Transcriptional Networks That Correlate With Tumor Phenotype.

Authors:  Mark A Applebaum; Erin K Barr; Jason Karpus; Ji Nie; Zhou Zhang; Amy E Armstrong; Sakshi Uppal; Madina Sukhanova; Wei Zhang; Alexandre Chlenski; Helen R Salwen; Emma Wilkinson; Marija Dobratic; Robert Grossman; Lucy A Godley; Barbara E Stranger; Chuan He; Susan L Cohn
Journal:  JCO Precis Oncol       Date:  2019-05-16

Review 4.  DNA methylation/hydroxymethylation in melanoma.

Authors:  Siqi Fu; Haijing Wu; Huiming Zhang; Christine G Lian; Qianjin Lu
Journal:  Oncotarget       Date:  2017-05-30

5.  Dysregulation and prognostic potential of 5-methylcytosine (5mC), 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) levels in prostate cancer.

Authors:  Tine Maj Storebjerg; Siri H Strand; Søren Høyer; Anne-Sofie Lynnerup; Michael Borre; Torben F Ørntoft; Karina D Sørensen
Journal:  Clin Epigenetics       Date:  2018-08-07       Impact factor: 6.551

  5 in total

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