| Literature DB >> 27708784 |
Daniele Kazue Sugioka1, Carlos Eduardo Ibaldo Gonçalves1, Maria da Graça Bicalho1.
Abstract
BACKGROUND: Since the discovery of specific histocompatibility, literature has associated genes involved in the immune response, like the Human Leucocyte Antigen (HLA), with a better prognosis in transplantation. However, other non-HLA genes may also influence the immune process, such as the genes encoding the immunoglobulin-like receptors of natural killer cells (KIRs). The discovery that NK cell KIR receptors interact with conservative epitopes (C1, C2, Bw4) presented in HLA class I molecules that are genetically polymorphic, also observed in KIR genes, led to the investigation of the relevance of the KIR system to hematopoietic stem cell transplant. The cure of patients with leukemias and other hematological malignancies after bone marrow transplantation (BMT) has been attributed in part to the ability of the donor immune cells, present in the graft, to recognize and eliminate neoplastic cells of the patient. The cytotoxic activity of NK cells is mediated by the absence of HLA class I-specific ligands on the target cell surface to inhibitory KIR receptors (hypothesis of "missing-self").Entities:
Keywords: HLA; KIR; Leukemia
Year: 2016 PMID: 27708784 PMCID: PMC5041293 DOI: 10.1186/s12878-016-0064-6
Source DB: PubMed Journal: BMC Hematol ISSN: 2052-1839
General characteristics of patients (N = 39)
| Gender | Age | Ethnic group | |||||||
|---|---|---|---|---|---|---|---|---|---|
| Disease | N | (%) | M | F | Average | Std. Dev. | White | Mulatto | Black |
| Bone Marrow Aplasia | 1 | 0.03 | 0 | 1 | 30.0 | 0.00 | 1 | 0 | 0 |
| Paroxysmal Nocturna Hemoglobinuria | 2 | 0.05 | 2 | 0 | 31.5 | 2.10 | 2 | 0 | 0 |
| NK Leukemia Cells | 1 | 0.03 | 1 | 0 | 13.0 | 0.00 | 1 | 0 | 0 |
| Non Hodgkin Lymphoma - Follicular | 1 | 0.03 | 0 | 1 | 39.0 | 0.00 | 1 | 0 | 0 |
| Acute Lymphoid Leukemia | 13 | 0.33 | 7 | 6 | 15.2 | 16.70 | 11 | 2 | 0 |
| Acute Myeloid Leukemia | 11 | 0.28 | 7 | 4 | 35.7 | 17.80 | 3 | 0 | 0 |
| Chronic Myeloid Leukemia | 3 | 0.08 | 3 | 0 | 31.7 | 9.60 | 1 | 0 | 0 |
| Myelodysplasia | 1 | 0.03 | 1 | 0 | 23.0 | 0.00 | 2 | 0 | 0 |
| Myelofibrosis | 2 | 0.05 | 1 | 1 | 50.5 | 12.00 | 1 | 0 | 0 |
| Multiple Myeloma | 1 | 0.03 | 1 | 0 | 40.0 | 0.00 | 1 | 1 | 0 |
| MyelodysplasticMyeloproliferativeSyndrome | 2 | 0.05 | 1 | 1 | 42.0 | 1.40 | 10 | 1 | 0 |
| Not Informed | 1 | 0.03 | 1 | 0 | NI | NI | 1 | 0 | 0 |
| Total | 39 | 1 | 25 | 14 | 35 | 4 | 0 | ||
M male, F female, Std. Dev. standard deviation; IBGE ethnic classification
Distribution of KIR genes frequenciesin patients (N = 39)
|
| |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2DL1 | 2DL2 | 2DL3 |
| 2DL5 | 2DP1 | 2DS1 | 2DS2 | 2DS3 | 2DS4 | 2DS5 | 3DL1 |
|
|
| 3DS1 | ||
| Patients | absolutefrequency | 35 | 9 | 36 | 39 | 11 | 37 | 6 | 12 | 5 | 36 | 11 | 37 | 39 | 39 | 39 | 10 |
|
| relativefrequency | 0,90 | 0,23 | 0,92 | 1,00 | 0,28 | 0,95 | 0,15 | 0,31 | 0,13 | 0,92 | 0,28 | 0,95 | 1,00 | 1,00 | 1,00 | 0,26 |
| genefrequency | 0,68 | 0,12 | 0,72 | 1,00 | 0,15 | 0,77 | 0,08 | 0,17 | 0,07 | 0,72 | 0,15 | 0,77 | 1,00 | 1,00 | 1,00 | 0,14 | |
| BoneMarrow Aplasia | absolutefrequency | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | |
| ParoxysmalNocturnaHemoglobinuria | absolutefrequency | 2 | 0 | 2 | 2 | 0 | 2 | 0 | 1 | 0 | 2 | 0 | 2 | 2 | 2 | 2 | 0 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,50 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,29 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
| NK LeukemiaCells | absolutefrequency | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
| Non Hodgkin Lymphoma - Follicular | absolutefrequency | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
| AcuteLymphoidLeukemia | absolutefrequency | 12 | 3 | 12 | 13 | 4 | 13 | 2 | 3 | 2 | 12 | 5 | 13 | 13 | 13 | 13 | 2 |
|
| relativefrequency | 0,92 | 0,23 | 0,92 | 1,00 | 0,31 | 1,00 | 0,15 | 0,23 | 0,15 | 0,92 | 0,38 | 1,00 | 1,00 | 1,00 | 1,00 | 0,15 |
| genefrequency | 0,72 | 0,12 | 0,72 | 1,00 | 0,17 | 1,00 | 0,08 | 0,12 | 0,08 | 0,72 | 0,22 | 1,00 | 1,00 | 1,00 | 1,00 | 0,08 | |
| AcuteMyeloidLeukemia | absolutefrequency | 8 | 3 | 9 | 11 | 4 | 9 | 2 | 5 | 2 | 9 | 3 | 10 | 11 | 11 | 11 | 5 |
|
| relativefrequency | 0,73 | 0,27 | 0,82 | 1,00 | 0,36 | 0,82 | 0,18 | 0,45 | 0,18 | 0,82 | 0,27 | 0,91 | 1,00 | 1,00 | 1,00 | 0,45 |
| genefrequency | 0,48 | 0,15 | 0,57 | 1,00 | 0,20 | 0,57 | 0,10 | 0,26 | 0,10 | 0,57 | 0,15 | 0,70 | 1,00 | 1,00 | 1,00 | 0,26 | |
| ChronicMyeloidLeukemia | absolutefrequency | 3 | 0 | 3 | 3 | 0 | 3 | 0 | 0 | 0 | 3 | 1 | 3 | 3 | 3 | 3 | 0 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,33 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,18 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
| Myelodysplasia | absolutefrequency | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
|
| relativefrequency | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 |
| genefrequency | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | |
| Myelofibrosis | absolutefrequency | 2 | 0 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 2 | 2 | 2 | 2 | 0 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
| MultipleMyeloma | absolutefrequency | 1 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 0 |
|
| relativefrequency | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 1,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 1,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
| MyelodysplasticMyeloproliferativeSyndrome | absolutefrequency | 2 | 0 | 2 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 2 | 2 | 2 | 2 | 1 |
|
| relativefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,50 |
| genefrequency | 1,00 | 0,00 | 1,00 | 1,00 | 0,00 | 1,00 | 0,00 | 0,00 | 0,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,29 | |
| NotInformed | absolutefrequency | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 0 |
|
| relativefrequency | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 |
| genefrequency | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 0,00 | 1,00 | 1,00 | 1,00 | 1,00 | 0,00 | |
Genes in bold are those genes called “framewok genes
Frequency of each KIR gene in patients (N = 39) and controls (N = 136)
|
| Patient | Control |
| |
|---|---|---|---|---|
| ( | ( | |||
| Framework |
| 39 (100 %) | 136 (100 %) | 1.0000 |
|
| 39 (100 %) | 136 (100 %) | 1.0000 | |
|
| 39 (100 %) | 136 (100 %) | 1.0000 | |
|
| 39 (100 %) | 136 (100 %) | 1.0000 | |
| Haplotype A |
| 36 (92 %) | 129 (95 %) | 0.6936 |
|
| 35 (90 %) | 130 (96 %) | 0.2329 | |
|
| 36 (92 %) | 118 (87 %) | 0.4173 | |
|
| 37 (95 %) | 129 (95 %) | 1.0000 | |
| Haplotype B |
| 6 (15 %) | 59 (43 %) |
|
|
| 12 (31 %) | 78 (57 %) |
| |
|
| 5 (13 %) | 45 (33 %) |
| |
|
| 11 (28 %) | 45 (33 %) | 0.6976 | |
|
| 10 (26 %) | 53 (39 %) | 0.1356 | |
|
| 9 (23 %) | 75 (55 %) |
| |
|
| 11 (28 %) | 72 (53 %) |
| |
| Haplotype A/B |
| 37 (95 %) | 131 (96 %) | 0.6465 |
Genes in bold showed significance for the statistical test (a)
Frequency of each KIR gene from patients with ALL (N = 12) and AML (N = 11)
| All | AML |
| ||
|---|---|---|---|---|
|
| ( | ( | ||
| Framework |
| 12 (100 %) | 11 (100 %) | 1.0000 |
|
| 12 (100 %) | 11 (100 %) | 1.0000 | |
|
| 12 (100 %) | 11 (100 %) | 1.0000 | |
|
| 12 (100 %) | 11 (100 %) | 1.0000 | |
| Haplotype A |
| 11 (92 %) | 9 (82 %) | 0.5921 |
|
| 11 (92 %) | 8 (73 %) | 0.3168 | |
|
| 11 (92 %) | 9 (82 %) | 0.5901 | |
|
| 12 (100 %) | 10 (91 %) | 0.4783 | |
| Haplotype B |
| 10 (83 %) | 9 (82 %) | 1.0000 |
|
| 3 (25 %) | 3 (27 %) | 1.0000 | |
|
| 2 (17 %) | 9 (82 %) |
| |
|
| 5 (42 %) | 3 (27 %) | 0.6668 | |
|
| 2 (17 %) | 5 (45 %) | 0.1930 | |
|
| 3 (25 %) | 3 (27 %) | 1.0000 | |
|
| 4 (33 %) | 4 (36 %) | 1.0000 | |
| Haplotype A/B |
| 12 (100 %) | 9 (82 %) | 0.2174 |
Genes in bold showed significance for the statistical test (a)
Fig. 1Phenotypic frequency related to the presence/absence of KIR genes in patients (N = 39) and healthy controls (N = 136). Genes marked with (*) showed significance for the stastical test
Fig. 2Phenotypic frequency related to the presence/absence of KIR genes in ALL patients (N = 12) and AML patients (N = 11). Genes marked with (*) showed significance for the stastical test