| Literature DB >> 27688882 |
Rory P Wilson1, Mark D Holton2, James S Walker2, Emily L C Shepard1, D Mike Scantlebury3, Vianney L Wilson1, Gwendoline I Wilson1, Brenda Tysse1, Mike Gravenor4, Javier Ciancio5, Melitta A McNarry6, Kelly A Mackintosh6, Lama Qasem7, Frank Rosell8, Patricia M Graf9, Flavio Quintana5, Agustina Gomez-Laich5, Juan-Emilio Sala5, Christina C Mulvenna3, Nicola J Marks3, Mark W Jones2.
Abstract
BACKGROUND: We are increasingly using recording devices with multiple sensors operating at high frequencies to produce large volumes of data which are problematic to interpret. A particularly challenging example comes from studies on animals and humans where researchers use animal-attached accelerometers on moving subjects to attempt to quantify behaviour, energy expenditure and condition.Entities:
Keywords: G-sphere; Spherical plots; Tri-axial acceleration; Visualisation
Year: 2016 PMID: 27688882 PMCID: PMC5035456 DOI: 10.1186/s40462-016-0088-3
Source DB: PubMed Journal: Mov Ecol ISSN: 2051-3933 Impact factor: 3.600
Fig. 1Example behavioural data from a cormorant. Six dives and a short period of flight are visualised by (a) a point- based g-sphere [with point colour equating with DBA]. b shows the same data as (a) but as a Dubai plot. Both (c) images depict urchin plots of (b); C1 shows percentages of DBA allocation taken across the whole g-sphere while C2 shows percentages amounting to 100 % per facet. Note the higher values of DBA attributed to flight and descent of the water column, particularly emphasized by the 100 % facet percentage. Note also how certain spines show multi-modes (e.g. white arrow) which can be indicative of different behaviours at one body attitude
Fig. 2Examples of posture and energy-linked posture visualised for two contrasting species (a human and a fish) over 24 h. The human data are taken from a person on a walking/camping tour while the fish data are from a hole-dwelling reef species that often rests by wedging itself at unusual angles. The left hand figures (a) show spherical histogram (Dubai) plots, indicating how time is allocated to different body postures [the ‘North pole’ position shows the species in the ‘normal’ upright position]. The first right-hand figure for each species (b) shows how each posture is linked to varying putative power levels. Note how the human has higher power-proxy levels associated with the vertical posture due to walking. Both the human and the fish have low power-proxy levels at low ‘latitude’ angles acquired during resting/sleep, exemplified by the large diameter blue discs. Data normalized to give a global percentage for all angles may hide infrequent, but higher-energy, activities. Normalising the data to 100 % per facet (c) highlights these though. In this case, the low-energy life style of the fish is still apparent (cf. B), with higher energies occurring fleetingly and only when the fish is vertical (white arrow). The colour coding has blue as low, and red as high, values
Fig. 3Example urchin plots for four consecutive 24 h periods after the release of a European badger (wearing a collar-mounted accelerometer) following anaesthesia. The ‘North pole’ facets show when the animal was properly horizontal (ie in standing or walking posture). Note how the first two days show no high energy activity because the animal was either resting or asleep. The second day shows only four changes in position. By day three, higher energy, normal posture activities such as walking are apparent at the North pole. This process is further enhanced in day 4, with North pole spine DBA distributions having modes that have moved up the length of the spines to indicate higher power use. DBA values are colour-coded with maximum values (in red) of 1 g
Fig. 4Example posture and DBA values associated with ‘state’ in humans. a shows two Dubai plots for a person walking after seeing ‘happy’ and ‘sad’ film clips (higher frequencies are coded by warmer colours). A third differential Dubai plot highlights the difference between the two situations (blue = a higher relative frequency of ‘happy’ points per facet while red = a higher relative frequency of ‘sad’ points per facet). Note how the two conditions are reflected in the postural changes (b) shows urchin plots for someone trekking across snow pulling a sledge one minute before a fall and one minute after recovering from the fall. The differential urchin shows both differences in postures adopted between the two situations as well as the dynamism of the walking (red shows a higher relative DBA frequency ‘before the fall’ while blue shows the reverse)
Fig. 5Example ‘lifestyle’ plots for different species and situations. These show how DBA values are distributed across the surface of the g-sphere (continuous lines) and the time allocated to those values (dashed lines of equivalent colour) over 24 h for (a) 3 Magellanic penguins (blue), 3 Eurasian beavers (purple) and 3 domestic sheep (red) and (b) three people; a child (yellow) and 2 adults, one of whom hiked extensively during the period (red) while the other was essentially sedentary (blue). Note the species-specific similarities (species that employ most diverse body angles have the highest percentage of the sphere coverage) but that differences between individuals can be manifest in either the time or DBA allocations on the sphere