Literature DB >> 27676313

DNA-Based Nanopore Sensing.

Lei Liu1, Hai-Chen Wu1,2.   

Abstract

Nanopore sensing is an attractive, label-free approach that can measure single molecules. Although initially proposed for rapid and low-cost DNA sequencing, nanopore sensors have been successfully employed in the detection of a wide variety of substrates. Early successes were mostly achieved based on two main strategies by 1) creating sensing elements inside the nanopore through protein mutation and chemical modification or 2) using molecular adapters to enhance analyte recognition. Over the past five years, DNA molecules started to be used as probes for sensing rather than substrates for sequencing. In this Minireview, we highlight the recent research efforts of nanopore sensing based on DNA-mediated characteristic current events. As nanopore sensing is becoming increasingly important in biochemical and biophysical studies, DNA-based sensing may find wider applications in investigating DNA-involving biological processes.
© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Keywords:  DNA probes; current signatures; nanopores; quantification; sensing

Mesh:

Substances:

Year:  2016        PMID: 27676313     DOI: 10.1002/anie.201604405

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  15 in total

1.  Channel from bacterial virus T7 DNA packaging motor for the differentiation of peptides composed of a mixture of acidic and basic amino acids.

Authors:  Zhouxiang Ji; Peixuan Guo
Journal:  Biomaterials       Date:  2019-05-21       Impact factor: 12.479

2.  Electrochemical impedance biosensor array based on DNAzyme-functionalized single-walled carbon nanotubes using Gaussian process regression for Cu(II) and Hg(II) determination.

Authors:  Hui Wang; Yang Liu; Jun Wang; Benhai Xiong; Xiaopeng Hou
Journal:  Mikrochim Acta       Date:  2020-03-09       Impact factor: 5.833

3.  Translocation Behaviors of Synthetic Polyelectrolytes through Alpha-Hemolysin (α-HL) and Mycobacterium smegmatis Porin A (MspA) Nanopores.

Authors:  Xiaoqin Wang; Kaden C Stevens; Jeffrey M Ting; Alexander E Marras; Gelareh Rezvan; Xiaojun Wei; Nader Taheri-Qazvini; Matthew V Tirrell; Chang Liu
Journal:  J Electrochem Soc       Date:  2022-05-11       Impact factor: 4.386

Review 4.  A Critical Review on the Sensing, Control, and Manipulation of Single Molecules on Optofluidic Devices.

Authors:  Mahmudur Rahman; Kazi Rafiqul Islam; Md Rashedul Islam; Md Jahirul Islam; Md Rejvi Kaysir; Masuma Akter; Md Arifur Rahman; S M Mahfuz Alam
Journal:  Micromachines (Basel)       Date:  2022-06-18       Impact factor: 3.523

5.  Dynamic Interactions between Lipid-Tethered DNA and Phospholipid Membranes.

Authors:  Patrick M Arnott; Himanshu Joshi; Aleksei Aksimentiev; Stefan Howorka
Journal:  Langmuir       Date:  2018-10-10       Impact factor: 3.882

6.  Folding-upon-Repair DNA Nanoswitches for Monitoring the Activity of DNA Repair Enzymes.

Authors:  Nada Farag; Rosanna Mattossovich; Rosa Merlo; Łukasz Nierzwicki; Giulia Palermo; Alessandro Porchetta; Giuseppe Perugino; Francesco Ricci
Journal:  Angew Chem Int Ed Engl       Date:  2021-02-17       Impact factor: 15.336

7.  Nanopore electric snapshots of an RNA tertiary folding pathway.

Authors:  Xinyue Zhang; Dong Zhang; Chenhan Zhao; Kai Tian; Ruicheng Shi; Xiao Du; Andrew J Burcke; Jing Wang; Shi-Jie Chen; Li-Qun Gu
Journal:  Nat Commun       Date:  2017-11-13       Impact factor: 14.919

8.  Making of a single solid-state nanopore on the wall of fused silica capillary.

Authors:  Fang Fang; Yan-Qin He; Li Tian; Yun-Yun Li; Zhi-Yong Wu
Journal:  R Soc Open Sci       Date:  2018-06-06       Impact factor: 2.963

9.  Biosensing Detection of the SARS-CoV-2 D614G Mutation.

Authors:  Yang Zhang; Hui Xi; Mario Juhas
Journal:  Trends Genet       Date:  2020-12-24       Impact factor: 11.639

10.  DNA nanotechnology assisted nanopore-based analysis.

Authors:  Taoli Ding; Jing Yang; Victor Pan; Nan Zhao; Zuhong Lu; Yonggang Ke; Cheng Zhang
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

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