Literature DB >> 27670110

Probing the metabolic heterogeneity of live Euglena gracilis with stimulated Raman scattering microscopy.

Yoshifumi Wakisaka1, Yuta Suzuki2, Osamu Iwata3, Ayaka Nakashima3, Takuro Ito4,5, Misa Hirose6, Ryota Domon6, Mai Sugawara6, Norimichi Tsumura6, Hiroshi Watarai7, Tomoyoshi Shimobaba8, Kengo Suzuki3, Keisuke Goda1,9,10, Yasuyuki Ozeki2.   

Abstract

Understanding metabolism in live microalgae is crucial for efficient biomaterial engineering, but conventional methods fail to evaluate heterogeneous populations of motile microalgae due to the labelling requirements and limited imaging speeds. Here, we demonstrate label-free video-rate metabolite imaging of live Euglena gracilis and statistical analysis of intracellular metabolite distributions under different culture conditions. Our approach provides further insights into understanding microalgal heterogeneity, optimizing culture methods and screening mutant microalgae.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27670110     DOI: 10.1038/nmicrobiol.2016.124

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  13 in total

Review 1.  Vibrational spectroscopic imaging of living systems: An emerging platform for biology and medicine.

Authors:  Ji-Xin Cheng; X Sunney Xie
Journal:  Science       Date:  2015-11-27       Impact factor: 47.728

Review 2.  Fluorescence microscopy.

Authors:  Jeff W Lichtman; José-Angel Conchello
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

3.  Cellular heterogeneity: do differences make a difference?

Authors:  Steven J Altschuler; Lani F Wu
Journal:  Cell       Date:  2010-05-14       Impact factor: 41.582

4.  In vivo chemical and structural analysis of plant cuticular waxes using stimulated Raman scattering microscopy.

Authors:  George R Littlejohn; Jessica C Mansfield; David Parker; Rob Lind; Sarah Perfect; Mark Seymour; Nicholas Smirnoff; John Love; Julian Moger
Journal:  Plant Physiol       Date:  2015-03-17       Impact factor: 8.340

5.  Imaging of lipids in microalgae with coherent anti-stokes Raman scattering microscopy.

Authors:  Lillie Cavonius; Helen Fink; Juris Kiskis; Eva Albers; Ingrid Undeland; Annika Enejder
Journal:  Plant Physiol       Date:  2015-01-12       Impact factor: 8.340

6.  Fluorescence activated cell sorting.

Authors:  W A Bonner; H R Hulett; R G Sweet; L A Herzenberg
Journal:  Rev Sci Instrum       Date:  1972-03       Impact factor: 1.523

7.  An outlook on microalgal biofuels.

Authors:  René H Wijffels; Maria J Barbosa
Journal:  Science       Date:  2010-08-13       Impact factor: 47.728

8.  Label-free biomedical imaging with high sensitivity by stimulated Raman scattering microscopy.

Authors:  Christian W Freudiger; Wei Min; Brian G Saar; Sijia Lu; Gary R Holtom; Chengwei He; Jason C Tsai; Jing X Kang; X Sunney Xie
Journal:  Science       Date:  2008-12-19       Impact factor: 47.728

9.  Antitumor activity of the β-glucan paramylon from Euglena against preneoplastic colonic aberrant crypt foci in mice.

Authors:  Toshiaki Watanabe; Ryoko Shimada; Ai Matsuyama; Masahiro Yuasa; Hiromi Sawamura; Eriko Yoshida; Kengo Suzuki
Journal:  Food Funct       Date:  2013-11       Impact factor: 5.396

10.  Coherent anti-Stokes Raman scattering and spontaneous Raman spectroscopy and microscopy of microalgae with nitrogen depletion.

Authors:  X N He; J Allen; P N Black; T Baldacchini; X Huang; H Huang; L Jiang; Y F Lu
Journal:  Biomed Opt Express       Date:  2012-10-18       Impact factor: 3.732

View more
  22 in total

1.  On-chip light-sheet fluorescence imaging flow cytometry at a high flow speed of 1 m/s.

Authors:  Taichi Miura; Hideharu Mikami; Akihiro Isozaki; Takuro Ito; Yasuyuki Ozeki; Keisuke Goda
Journal:  Biomed Opt Express       Date:  2018-06-27       Impact factor: 3.732

2.  Large-scale label-free single-cell analysis of paramylon in Euglena gracilis by high-throughput broadband Raman flow cytometry.

Authors:  Kotaro Hiramatsu; Koji Yamada; Matthew Lindley; Kengo Suzuki; Keisuke Goda
Journal:  Biomed Opt Express       Date:  2020-03-03       Impact factor: 3.732

Review 3.  Applications of vibrational tags in biological imaging by Raman microscopy.

Authors:  Zhilun Zhao; Yihui Shen; Fanghao Hu; Wei Min
Journal:  Analyst       Date:  2017-10-23       Impact factor: 4.616

4.  Absorbance spectra of the hematochrome-like granules and eyespot of Euglena gracilis by scan-free absorbance spectral imaging A(x, y, λ) within the live cells.

Authors:  Kyohei Yamashita; Takafumi Yagi; Takumi Isono; Yusuke Nishiyama; Masafumi Hashimoto; Koji Yamada; Kengo Suzuki; Eiji Tokunaga
Journal:  J Plant Res       Date:  2019-04-12       Impact factor: 2.629

5.  One Cell at a Time: Advances in Single-Cell Methods and Instrumentation for Discovery in Aquatic Microbiology.

Authors:  Vesna Grujcic; Gordon T Taylor; Rachel A Foster
Journal:  Front Microbiol       Date:  2022-05-23       Impact factor: 6.064

6.  SRS-FISH: A high-throughput platform linking microbiome metabolism to identity at the single-cell level.

Authors:  Xiaowei Ge; Fátima C Pereira; Matthias Mitteregger; David Berry; Meng Zhang; Bela Hausmann; Jing Zhang; Arno Schintlmeister; Michael Wagner; Ji-Xin Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-21       Impact factor: 12.779

7.  Instant diagnosis of gastroscopic biopsy via deep-learned single-shot femtosecond stimulated Raman histology.

Authors:  Zhijie Liu; Wei Su; Jianpeng Ao; Min Wang; Qiuli Jiang; Jie He; Hua Gao; Shu Lei; Jinshan Nie; Xuefeng Yan; Xiaojing Guo; Pinghong Zhou; Hao Hu; Minbiao Ji
Journal:  Nat Commun       Date:  2022-07-13       Impact factor: 17.694

Review 8.  Biological imaging of chemical bonds by stimulated Raman scattering microscopy.

Authors:  Fanghao Hu; Lixue Shi; Wei Min
Journal:  Nat Methods       Date:  2019-08-30       Impact factor: 28.547

9.  Label-free, simultaneous quantification of starch, protein and triacylglycerol in single microalgal cells.

Authors:  Yuehui He; Peng Zhang; Shi Huang; Tingting Wang; Yuetong Ji; Jian Xu
Journal:  Biotechnol Biofuels       Date:  2017-11-17       Impact factor: 6.040

10.  Shape-based separation of microalga Euglena gracilis using inertial microfluidics.

Authors:  Ming Li; Hector Enrique Muñoz; Keisuke Goda; Dino Di Carlo
Journal:  Sci Rep       Date:  2017-09-07       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.