Literature DB >> 27666573

Haloparvum alkalitolerans sp. nov., alkali-tolerant haloarchaeon isolated from commercial salt.

Yusuke Kondo1, Hiroaki Minegishi2,3, Akinobu Echigo2, Yasuhiro Shimane3, Masahiro Kamekura4, Takashi Itoh5, Moriya Ohkuma5, Akira Tanaka1, Naoko Takahashi-Ando1,2, Yasumasa Fukushima1,2, Yasuhiko Yoshida1,2, Kunio Ihara6, Ron Usami1,2.   

Abstract

A Gram-stain-negative, rod-pleomorphic, aerobic, halophilic archaeon, strain MK62-1T, was isolated from commercial salt made from seawater in the Philippines. Strain MK62-1T was able to grow at 2.1-4.7 M NaCl (with optimum at 2.1-2.6 M NaCl), pH 6.5-9.5 (optimum, pH 7.0-7.5) and 20-55 °C (optimum, 45-50 °C). Based on the orthologous 16S rRNA gene sequence, the closest relative was Haloparvum sedimenti JCM 30891T with 99.2 % similarity. The RNA polymerase subunit B' gene sequence also showed the highest similarity (97.4 %) to that of Haloparvum sedimenti DYS4T. The DNA G+C content of MK62-1T was 70.1 mol%, while that of Haloparvum sedimenti JCM 30891T was 69.5 mol% by the HPLC method. The levels of DNA-DNA relatedness between MK62-1T and Haloparvum sedimenti JCM 30891T were 60.6 and 60.8 % (reciprocally). The major polar lipids of the isolate were C20C20 archaeol derivatives of phosphatidylglycerol, phosphatidylglycerol phosphate methyl ester and phosphatidylglycerol sulfate. Based on the phenotypic and phylogenetic analyses, it is proposed that the isolate represents species within the genus Haloparvum, for which the name Haloparvum alkalitolerans sp. nov. is proposed. The type strain is MK62-1T (=JCM 30442T =KCTC 4214T).

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Year:  2016        PMID: 27666573     DOI: 10.1099/ijsem.0.001513

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  2 in total

1.  Diversity of Extremely Halophilic Archaeal and Bacterial Communities from Commercial Salts.

Authors:  Ashagrie Gibtan; Kyounghee Park; Mingyeong Woo; Jung-Kue Shin; Dong-Woo Lee; Jae Hak Sohn; Minjung Song; Seong Woon Roh; Sang-Jae Lee; Han-Seung Lee
Journal:  Front Microbiol       Date:  2017-05-10       Impact factor: 5.640

2.  Draft Genome Sequence of Haloparvum sedimenti Strain DYS4, the Type Species of the Genus Haloparvum, Isolated from a Salt Mine.

Authors:  Shaoxing Chen; Chuanming Wang; He Li; Yunmei Shen
Journal:  Genome Announc       Date:  2017-12-07
  2 in total

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