| Literature DB >> 27660114 |
Giuseppina Ortu1, Mohamad Assoum2,3, Udo Wittmann4, Sarah Knowles4, Michelle Clements4, Onésime Ndayishimiye5, Maria-Gloria Basáñez4,6, Colleen Lau3,7, Archie Clements7, Alan Fenwick4, Ricardo J Soares Magalhaes3,8.
Abstract
BACKGROUND: Soil-transmitted helminth (STH) infections are amongst the most prevalent infections in the world. Mass drug administration (MDA) programmes have become the most commonly used national interventions for endemic countries to achieve elimination. This paper aims to describe the effect of an 8-year MDA programme on the prevalence, intensity of infection and co-infection of STH in Burundi from 2007 to 2014 and critically appraise the trajectory towards STH elimination in the country.Entities:
Keywords: Burundi; Impact; Intensity; Mass drug administration; Prevalence; Soil-transmitted helminth infections; Spatial dependence analysis
Year: 2016 PMID: 27660114 PMCID: PMC5034474 DOI: 10.1186/s13071-016-1794-9
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1Map indicating the locations of pilot and extension studies sites in Burundi
Characteristics of study participants and mean prevalence estimated from the raw data of STH over five years of monitoring twelve pilot sentinel schools in Burundi. The last column contains data collected for a mapping survey in 2014 at the same schools. Added in parentheses are the standard errors for the raw mean prevalence and the raw intensity means , respectively
| Year | 2007 | 2008 | 2009 | 2010 | 2011 | 2014 |
|---|---|---|---|---|---|---|
| Number of participants | 3,616 | 3,476 | 4,944 | 5,062 | 4,680 | 650 |
| Mean age | 10.81 | 10.66 | 10.6 | 10.84 | 9.93 | 13.19 |
| Gender ratio (F:M) | 0.53 | 0.51 | 0.51 | 0.52 | 0.52 | 0.5 |
| Raw mean prevalence | ||||||
| Pooled STH | 0.32 (0.008) | 0.19 (0.007) | 0.27 (0.006) | 0.17 (0.005) | 0.16 (0.005) | 0.18 (0.015) |
|
| 0.14 (0.006) | 0.11 (0.005) | 0.18 (0.005) | 0.10 (0.004) | 0.11 (0.005) | 0.12 (0.013) |
|
| 0.03 (0.003) | 0.02 (0.002) | 0.04 (0.003) | 0.02 (0.002) | 0.02 (0.002) | 0.03 (0.007) |
| Hookworm | 0.18 (0.006) | 0.07 (0.004) | 0.08 (0.004) | 0.06 (0.003) | 0.04 (0.003) | 0.04 (0.008) |
| Raw mean intensity of infected pupils only | ||||||
|
| 2,667 (397) | 3,624 (624) | 793 (66) | 2,065 (147) | 1,970 (176) | 1,831 (418) |
|
| 177 (41) | 157 (52) | 112 (24) | 143 (33) | 91 (20) | 70 (23) |
| Hookworm | 111 (15) | 177 (28) | 85 (6) | 224 (51) | 104 (9) | 282 (151) |
| Intensity of Infection (uninfected/light/moderate/heavy): | ||||||
|
| 3,109/437/62/1 | 3,075/338/54/4 | 4,063/852/27/0 | 4,542/456/57/0 | 4,159/452/60/0 | 575/61/14/0 |
| (86/12/2/0) | (89/10/2/0) | (82/17/1/0) | (90/9/1/0) | (89/10/1/0) | (88/9/2/0) | |
|
| 3,488/116/4/0 | 3,412/62/1/0 | 4,728/211/2/0 | 4,969/85/1/0 | 4,578/91/2/0 | 629/21/0/0 |
| (97/3/0/0) | (98/2/0/0) | (96/4/0/0) | (98/2/0/0) | (98/2/0/0) | 97/3/0/0 | |
| Hookworm | 2,974/633/1/1 | 3,235/236/4/1 | 4,566/375/0/0 | 4,737/313/3/2 | 4,489/182/0/0 | 622/27/0/1 |
| (82/18/0/0) | (93/7/0/0) | (92/8/0/0) | (94/6/0/0) | (96/4/0/0) | (96/4/0/0) | |
Characteristics of study participants and mean prevalence estimated from the raw data of STH over four years of monitoring in 19 extension sentinel sites in Burundi. The last column contains data collected for a mapping survey in 2014 at 14 of the 19 extension schools. Added in parentheses are the standard errors for the raw mean prevalence and the raw intensity means , respectively
| Year | 2008 | 2009 | 2011 | 2014 |
|---|---|---|---|---|
| Number of participants | 5,700 | 6,378 | 8,869 | 700 |
| Mean age | 10.98 | 10.48 | 11.03 | 13.33 |
| Gender ratio (F:M) | 0.50 | 0.50 | 0.52 | 0.50 |
| Raw mean prevalence | ||||
| Pooled STH | 0.35 (0.006) | 0.26 (0.005) | 0.16 (0.004) | 0.20 (0.015) |
|
| 0.20 (0.005) | 0.10 (0.004) | 0.09 (0.003) | 0.10 (0.011) |
|
| 0.10 (0.004) | 0.10 (0.004) | 0.04 (0.002) | 0.03 (0.006) |
| Hookworm | 0.14 (0.005) | 0.09 (0.004) | 0.05 (0.002) | 0.08 (0.010) |
| Raw mean intensity of infected pupils only | ||||
|
| 2,081 (178) | 1,147 (191) | 1,581 (138) | 1,084 (258) |
|
| 122 (9) | 106 (12) | 86 (6) | 45 (6) |
| Hookworm | 100 (11) | 85 (6) | 120 (13) | 151 (36) |
| Intensity of infection (uninfected/light/moderate/heavy): | ||||
|
| 4,581/1,002/114/3 | 5,702/637/30/1 | 8,059/732/50/1 | 628/69/3/0 |
| (80/18/2/0) | (90/10/0/0) | (91/8/1/0) | (90/10/0/0) | |
|
| 5,150/542/6/0 | 5,736/628/6/0 | 8,478/362/2/0 | 682/18/0/0 |
| (90/10/0/0) | (90/10/0/0) | (96/4/0/0) | (97/3/0/0) | |
| Hookworm | 4,907/790/0/1 | 5,823/546/1/0 | 8,425/412/4/0 | 645/55/0/0 |
| (86/14/0/0) | (91/9/0/0) | (95/5/0/0) | (92/8/0/0) | |
Co-infection prevalence from 2007 to 2011, and mapping study 2014
| Year | Not infected (%) | Mono-infected (%) | AT (%) | AH (%) | TH (%) | ATH (%) |
|---|---|---|---|---|---|---|
| 2007 | 68.04 | 29.09 | 1.12 | 1.43 | 0.22 | 0.08 |
| 2008 | 71.01 | 24.14 | 2.72 | 1.03 | 0.50 | 0.60 |
| 2009 | 72.96 | 24.43 | 1.48 | 0.57 | 0.42 | 0.14 |
| 2010 | 82.61 | 16.66 | 0.55 | 0.12 | 0.04 | 0.02 |
| 2011 | 84.19 | 14.24 | 1.15 | 0.24 | 0.16 | 0.03 |
| 2014 | 81.11 | 17.85 | 0.37 | 0.52 | 0.15 | 0.00 |
Abbreviations: A, Ascaris; T, Trichuris; H, hookworm
Fig. 2Temporal changes (2007 to 2014) in the (raw) prevalence of soil-transmitted helminthiases (STH) in Burundi. Temporal changes in the raw prevalence of individual and pooled STH parasite species, as well as co-infection, at a pilot and b extension study schools. In a and b, each line represents an individual school. In c, each line represents one of the co-infection types analysed: Ascaris and Hookworm (AH), Ascaris and Trichuris (AT), Hookworm and Trichuris (HT), and infection with all three STH species (AHT)
Predictors of infection with STH overall, Ascaris lumbricoides and hookworm, across pilot study sentinel sites in Burundi from 2007 to 2011 combined with prevalence data obtained by a mapping survey in 2014 from the same schools. Results shown are from binomial mixed models. Age was standardised (mean centred and divided by the estimated standard deviation)
| Pooled STH |
| Hookworm | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|
|
|
| ||||||||
| Fixed effects | Category | Parameter | Adjusted odds ratio |
| Parameter | Adjusted odds ratio |
| Parameter | Adjusted odds ratio |
|
| (Intercept) | -0.90 (0.17) | 0.41 (0.29–0.56) | *** | -2.5 (0.36) | 0.08 (0.04–0.17) | *** | -2.20 (0.44) | 0.11 (0.05–0.26) | *** | |
| Year | 2008 | -0.90 (0.26) | 0.4 (0.24–0.67) | *** | -1.05 (0.4) | 0.35 (0.16–0.76) | ** | -1.29 (0.28) | 0.28 (0.16–0.47) | *** |
| 2009 | -0.43 (0.23) | 0.65 (0.41–1.01) | ns | -0.24 (0.45) | 0.79 (0.33–1.89) | ns | -0.87 (0.35) | 0.42 (0.21–0.82) | * | |
| 2010 | -0.90 (0.20) | 0.41 (0.27–0.61) | *** | -0.84 (0.26) | 0.43 (0.26–0.72) | ** | -1.36 (0.34) | 0.26 (0.13–0.5) | *** | |
| 2011 | -1.14 (0.23) | 0.32 (0.2–0.5) | *** | -0.48 (0.2) | 0.62 (0.41–0.92) | * | -2.26 (0.38) | 0.10 (0.05–0.22) | *** | |
| 2014 | -0.85 (0.25) | 0.43 (0.26–0.71) | *** | 0.05 (0.31) | 1.05 (0.57–1.93) | ns | -1.48 (0.5) | 0.23 (0.09–0.6) | ** | |
| Age | -0.07 (0.019) | 0.94 (0.9–0.97) | *** | -0.12 (0.025) | 0.89 (0.85–0.93) | *** | 0.02 (0.028) | 1.02 (0.97–1.08) | ns | |
| Age^2 | -0.01 (0.017) | 0.99 (0.95–1.02) | ns | -0.03 (0.023) | 0.97 (0.93–1.01) | ns | -0.02 (0.025) | 0.98 (0.94–1.03) | ns | |
| Sex (male) | 0.09 (0.037) | 1.09 (1.01–1.17) | * | 0.08 (0.048) | 1.08 (0.98–1.19) | ns | 0.09 (0.053) | 1.09 (0.98–1.21) | ns | |
| Random Effects | Variance | SD | Variance | SD | Variance | SD | ||||
| Pupil (Intercept) | 0.43 | 0.66 | *** | 0.56 | 0.75 | *** | 0.33 | 0.57 | *** | |
| School (Intercept) | 0.31 | 0.55 | 1.50 | 1.23 | 2.20 | 1.50 | ||||
| Year 2008 | 0.76 | 0.87 | 1.60 | 1.25 | 0.63 | 0.79 | ||||
| Year 2009 | 0.59 | 0.77 | 2.20 | 1.48 | 1.3 | 1.14 | ||||
| Year 2010 | 0.46 | 0.68 | 0.66 | 0.81 | 1.2 | 1.10 | ||||
| Year 2011 | 0.59 | 0.77 | 0.36 | 0.60 | 1.1 | 1.05 | ||||
| Year 2014 | 0.60 | 0.78 | 0.84 | 0.92 | 1.8 | 1.35 | ||||
| Random Slope year | *** | *** | *** | |||||||
Abbreviations: ns not significant (P > 0.05); SD standard deviation; SE standard error
*P ≤ 0.05; **P ≤ 0.01; ***P ≤ 0.001
Fig. 5Yearly semivariograms for hookworm infection (in decimal degrees). Each plot shows a semivariogram for each year of the impact study: a2007, b 2008, c 2009, d 2010, e 2011, f 2014
Predictors of infection with pooled STH species, Ascaris lumbricoides, hookworm, and Trichuris trichiura across 19 extension study sentinel sites in Burundi from 2008 to 2011 combined with prevalence data obtained by a re-evaluation survey in 2014 from 14 of the 19 extension schools. Results shown are from binomial mixed models. Age had been standardised (mean centred and divided by estimated standard deviation)
| Pooled STH |
| ||||||
|---|---|---|---|---|---|---|---|
|
|
| ||||||
| Fixed Effects | Parameter (SE) | Adjusted odds ratio (95 % CI) |
| Parameter (SE) | Adjusted odds ratio (95 % CI) |
| |
| (Intercept) | -0.75 (0.22) | 0.47 (0.31–0.73) | *** | -2.22 (0.39) | 0.11 (0.05–0.23) | *** | |
| Year | 2009 | -0.54 (0.21) | 0.58 (0.39–0.88) | * | -0.52 (0.31) | 0.59 (0.32–1.09) | ns |
| 2011 | -1.30 (0.17) | 0.27 (0.2–0.38) | *** | -0.92 (0.22) | 0.40 (0.26–0.62) | *** | |
| 2014 | -1.01 (0.21) | 0.36 (0.24–0.55) | *** | -0.71 (0.32) | 0.49 (0.26–0.93) | * | |
| Age | -0.02 (0.02) | 0.98 (0.94–1.02) | ns | -0.08 (0.026) | 0.92 (0.87–0.97) | ** | |
| Age^2 | -0.06 (0.017) | 0.94 (0.91–0.98) | *** | -0.04 (0.023) | 0.96 (0.92–1.01) | ns | |
| Sex (male) | 0.12 (0.037) | 1.13 (1.05–1.22) | *** | 0.11 (0.048) | 1.12 (1.02–1.23) | * | |
| Random Effects | Variance | SD | Variance | SD | |||
| Pupil (Intercept) | 0.24 | 0.49 | *** | 0.26 | 0.51 | *** | |
| School (Intercept) | 0.90 | 0.95 | 2.82 | 1.68 | |||
| Year 2009 | 0.78 | 0.89 | 1.65 | 1.28 | |||
| Year 2011 | 0.47 | 0.69 | 0.81 | 0.90 | |||
| Year 2014 | 0.44 | 0.67 | 1.08 | 1.04 | |||
| Random Slope year | *** | *** | |||||
| Hookworm |
| ||||||
|
|
| ||||||
| Fixed Effects | Parameter (SE) | Adjusted odds ratio (95 % CI) |
| Parameter (SE) | Adjusted odds ratio (95 % CI) |
| |
| (Intercept) | -2.05 (0.16) | 0.13 (0.09–0.18) | *** | -2.94 (0.28) | 0.05 (0.03–0.09) | *** | |
| Year | 2009 | -0.79 (0.21) | 0.45 (0.3–0.68) | *** | 0.08 (0.23) | 1.09 (0.70–1.69) | ns |
| 2011 | -1.39 (0.18) | 0.25 (0.17–0.36) | *** | -1.07 (0.18) | 0.34 (0.24–0.49) | *** | |
| 2014 | -1.60 (0.49) | 0.20 (0.08–0.53) | ** | -1.21 (0.33) | 0.30 (0.16–0.56) | *** | |
| Age | 0.05 (0.029) | 1.05 (1–1.12) | ns | -0.02 (0.031) | 0.98 (0.92–1.04) | ns | |
| Age^2 | -0.03 (0.025) | 0.97 (0.92–1.01) | ns | -0.1 (0.028) | 0.90 (0.85–0.95) | *** | |
| Sex (male) | 0.12 (0.052) | 1.13 (1.02–1.25) | * | 0.09 (0.058) | 1.09 (0.98–1.22) | ns | |
| Random Effects | Variance | SD | Variance | SD | |||
| Pupil (Intercept) | 0.16 | 0.40 | ns | 0.66 | 0.81 | *** | |
| School (Intercept) | 0.41 | 0.64 | 1.40 | 1.18 | |||
| Year 2009 | 0.70 | 0.84 | 0.82 | 0.90 | |||
| Year 2011 | 0.52 | 0.72 | 0.39 | 0.63 | |||
| Year 2014 | 1.96 | 1.4 | 0.28 | 0.53 | |||
| Random Slope year | *** | *** | |||||
Abbreviations: ns not significant (P > 0.05); SD standard deviation; SE standard error
*P ≤ 0.05; **P ≤ 0.01; ***P ≤ 0.001
Predictors for the presence of multiple infections across all 19 extension study sentinel sites in Burundi combined with the data obtained by a mapping survey in 2014 from 14 of the 19 extension schools. All pupils (infected and uninfected, n = 20,871 observations) were included in the data. Results are from a binomial mixed model, age had been mean-centred and divided by the estimate of its standard deviation (SD). The pseudo-R 2 values for this model were pseudo-R 2 MF = 0.196; R 2 marg = 0.079; R 2 cond. = 0.479
| Fixed effects | Category | Parameter | Adjusted odds ratio (CI) |
|
|---|---|---|---|---|
| (Intercept) | -3.61 (0.35) | 0.03 (0.01–0.05) | < 0.001 | |
| Year | 2009 | -0.57 (0.21) | 0.57 (0.37–0.86) | 0.008 |
| 2011 | -1.59 (0.21) | 0.2 (0.13–0.31) | < 0.001 | |
| 2014 | -1.88 (0.72) | 0.15 (0.04–0.62) | 0.009 | |
| Sex (male) | 0.17 (0.078) | 1.18 (1.01–1.37) | 0.033 | |
| Age | -0.03 (0.044) | 0.97 (0.89–1.06) | 0.529 | |
| Age^2 | -0.09 (0.039) | 0.91 (0.84–0.98) | 0.016 | |
| Random effects | Variance | SD |
| |
| Pupil (Intercept) | 0.55 | 0.74 | < 0.001 | |
| School (Intercept) | 2.00 | 1.40 | ||
| Year 2009 | 0.50 | 0.71 | ||
| Year 2011 | 0.30 | 0.55 | ||
| Year 2014 | 2.00 | 1.40 | ||
| Random slope year | < 0.001 | |||
Predictors for the presence of multiple infections across all extension study sentinel sites in Burundi combined with the data obtained by a mapping survey in 2014 from 14 of the 19 extension schools. Only data from infected pupils (n = 5,027 observations) was included. Results are from a binomial mixed model. Age and the egg counts for Ascaris lumbricoides, hookworm, and Trichuris trichiura in epg had been mean-centred and divided by the estimates of their standard deviations. The pseudo-R 2 values for this model were pseudo R 2 MF = 0.186; R 2 marg. = 0.300; R 2 cond. = 0.402
| Fixed effects | Category | Parameter | Adjusted odds ratio (CI) |
|
|---|---|---|---|---|
| (Intercept) | -2.06 (0.2) | 0.13 (0.09–0.19) | < 0.001 | |
| Year | 2009 | -0.8 (0.11) | 0.45 (0.36–0.56) | < 0.001 |
| 2011 | -0.53 (0.11) | 0.59 (0.47–0.73) | < 0.001 | |
| 2014 | -1.27 (0.4) | 0.28 (0.13–0.62) | 0.002 | |
| Age | -0.01 (0.046) | 0.99 (0.9–1.08) | 0.788 | |
| Sex (male) | 0.11 (0.089) | 1.12 (0.94–1.33) | 0.198 | |
|
| 0.22 (0.055) | 1.24 (1.12–1.39) | < 0.001 | |
| Hookworm (epg) | 0.41 (0.075) | 1.5 (1.3–1.74) | < 0.001 | |
|
| 1.14 (0.084) | 3.12 (2.65–3.68) | < 0.001 | |
| Random effects | Variance | SD |
| |
| Pupil (Intercept) | 0 | 0 | 1 | |
| School (Intercept) | 0.56 | 0.75 | ||
Predictors for an infection with Ascaris lumbricoides of at least moderate intensity across all 19 extension study sentinel sites in Burundi combined with the intensity data obtained by a mapping survey in 2014 from 14 of those 19 schools. Results shown are from binomial mixed models based on n = 20,879 observations. Age had been mean centred and divided by the estimate of its standard deviation. The pseudo-R 2 values for this model were pseudo-R 2 MF = 0.195; R 2 marg. = 0.078, R 2 cond. = 0.662
| Fixed effects | Category | Parameter | Adjusted odds ratio (CI) |
|
|---|---|---|---|---|
| (Intercept) | -5.92 (0.72) | 0.0 (0–0.01) | < 0.001 | |
| Year | 2009 | -2.27 (1.2) | 0.1 (0.01–1.15) | 0.065 |
| 2011 | -1.23 (0.74) | 0.29 (0.07–1.25) | 0.097 | |
| 2014 | -0.46 (1.5) | 0.63 (0.03–11.83) | 0.759 | |
| Age | -0.21 (0.082) | 0.81 (0.69–0.95) | 0.009 | |
| Age^2 | -0.11 (0.075) | 0.89 (0.77–1.04) | 0.137 | |
| Sex (male) | 0.16 (0.15) | 1.18 (0.88–1.58) | 0.282 | |
| Random effects | Variance | SD |
| |
| Pupil (Intercept) | 0.40 | 0.63 | ||
| School (Intercept) | 5.30 | 2.30 | ||
| Year 2009 | 1.50 | 1.20 | ||
| Year 2011 | 0.82 | 0.91 | ||
| Year 2014 | 6.80 | 2.60 | ||
| Random Slope Year | < 0.001 |
Fig. 3Yearly semivariograms for Ascaris lumbricoides (in decimal degrees). Each plot shows a semivariogram for each year of the impact study: a 2007, b 2008, c 2009, d 2010, e 2011, f 2014
Fig. 4Yearly semivariograms for Trichuris trichiura (in decimal degrees). Each plot shows a semivariogram for each year of the impact study: a 2007, b 2008, c 2009, d 2010, e 2011, f 2014