Literature DB >> 27651104

Dynamical Bifurcation in Gas-Phase XH- + CH3 Y SN 2 Reactions: The Role of Energy Flow and Redistribution in Avoiding the Minimum Energy Path.

Yaicel G Proenza1, Miguel A F de Souza2, Ricardo L Longo3.   

Abstract

The gas-phase reactions of XH- (X=O, S) + CH3 Y (Y=F, Cl, Br) span nearly the whole range of SN 2 pathways, and show an intrinsic reaction coordinate (IRC) (minimum energy path) with a deep well owing to the CH3 XH⋅⋅⋅Y- (or CH3 S- ⋅⋅⋅HF) hydrogen-bonded postreaction complex. MP2 quasiclassical-type direct dynamics starting at the [HX⋅⋅⋅CH3 ⋅⋅⋅Y]- transition-state (TS) structure reveal distinct mechanistic behaviors. Trajectories that yield the separated CH3 XH+Y- (or CH3 S- +HF) products directly are non-IRC, whereas those that sample the CH3 XH⋅⋅⋅Y- (or CH3 S- ⋅⋅⋅HF) complex are IRC. The IRCIRC/non-IRC ratios of 90:10, 40:60, 25:75, 2:98, 0:100, and 0:100 are obtained for (X, Y)=(S, F), (O, F), (S, Cl), (S, Br), (O, Cl), and (O, Br), respectively. The properties of the energy profiles after the TS cannot provide a rationalization of these results. Analysis of the energy flow in dynamics shows that the trajectories cross a dynamical bifurcation, and that the inability to follow the minimum energy path arises from long vibration periods of the X-C⋅⋅⋅Y bending mode. The partition of the available energy to the products into vibrational, rotational, and translational energies reveals that if the vibrational contribution is more than 80 %, non-IRC behavior dominates, unless the relative fraction of the rotational and translational components is similar, in which case a richer dynamical mechanism is shown, with an IRC/non-IRC ratio that correlates to this relative fraction.
© 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  BOMD simulations; energy partitioning; nucleophilic substitution; reaction mechanisms; transition states; vibrational modes

Year:  2016        PMID: 27651104     DOI: 10.1002/chem.201602976

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  4 in total

1.  Spin-Forbidden Branching in the Mechanism of the Intrinsic Haber-Weiss Reaction.

Authors:  Ezequiel F V Leitão; Elizete Ventura; Miguel A F de Souza; José M Riveros; Silmar A do Monte
Journal:  ChemistryOpen       Date:  2017-03-23       Impact factor: 2.911

2.  Insights into the nucleophilic substitution of pyridine at an unsaturated carbon center.

Authors:  Pan Du; Jiyang Zhao; Shanshan Liu; Zhen Yue
Journal:  RSC Adv       Date:  2021-07-12       Impact factor: 3.361

Review 3.  Nucleophilic Substitution (SN 2): Dependence on Nucleophile, Leaving Group, Central Atom, Substituents, and Solvent.

Authors:  Trevor A Hamlin; Marcel Swart; F Matthias Bickelhaupt
Journal:  Chemphyschem       Date:  2018-04-19       Impact factor: 3.102

4.  SN2 Reactions with an Ambident Nucleophile: A Benchmark Ab Initio Study of the CN- + CH3Y [Y = F, Cl, Br, and I] Systems.

Authors:  Zsolt Kerekes; Domonkos A Tasi; Gábor Czakó
Journal:  J Phys Chem A       Date:  2022-02-02       Impact factor: 2.781

  4 in total

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