Literature DB >> 27649332

A nuclease-assisted label-free aptasensor for fluorescence turn-on detection of ATP based on the in situ formation of copper nanoparticles.

Quanwei Song1, Ruihua Wang2, Feifei Sun2, Hongkun Chen3, Zoumengke Wang2, Na Na2, Jin Ouyang4.   

Abstract

Owing to their promising advantages in biochemical analysis, aptamer-based sensing systems for the fluorescence detection of important biomolecules are being extensively investigated. Herein, we propose a turn-on fluorescent aptasensor for label-free detection of adenosine triphosphate (ATP) by utilizing the in situ formation of copper nanoparticles (CuNPs) and the specific digestion capability of exonuclease I (Exo I). In this assay, the addition of ATP can effectively hinder the digestion of aptamer-derived oligonucleotides due to the G-quadruplex structure. Accordingly, the remaining poly thymine at 5'-terminus of substrate DNA can serve as an efficient template for red-emitting fluorescent CuNPs with a Mega-Stokes shifting in buffered solution, which can be used to evaluate the concentration of ATP. This method is cost-effective and facile, because it avoids the use of traditional dye-labeled DNA strands and complex operation steps. Under optimized conditions, this method achieves a selective response for ATP with a detection limit of 93nM, and exhibits a good detection performance in biological samples. Copyright Â
© 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Adenosine triphosphate; Aptamer; Copper nanoparticles; Fluorescence detection; Lable-free; Turn-on

Mesh:

Substances:

Year:  2016        PMID: 27649332     DOI: 10.1016/j.bios.2016.09.029

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  8 in total

Review 1.  Recent progress in copper nanocluster-based fluorescent probing: a review.

Authors:  Taiping Qing; Kaiwu Zhang; Zhihe Qing; Xuan Wang; Caicheng Long; Peng Zhang; Haizhi Hu; Bo Feng
Journal:  Mikrochim Acta       Date:  2019-09-05       Impact factor: 5.833

2.  Fluorometric determination of microRNA-122 by using ExoIII-aided recycling amplification and polythymine induced formation of copper nanoparticles.

Authors:  Yafang Tang; Mingxiu Liu; Zilin Zhao; Qing Li; Xuehua Liang; Jianniao Tian; Shulin Zhao
Journal:  Mikrochim Acta       Date:  2019-02-01       Impact factor: 5.833

Review 3.  Functional Nucleic Acid Nanomaterials: Development, Properties, and Applications.

Authors:  Wentao Xu; Wanchong He; Zaihui Du; Liye Zhu; Kunlun Huang; Yi Lu; Yunbo Luo
Journal:  Angew Chem Int Ed Engl       Date:  2020-08-25       Impact factor: 16.823

4.  A Label-Free Fluorescent DNA Machine for Sensitive Cyclic Amplification Detection of ATP.

Authors:  Jingjing Zhang; Jialun Han; Shehong Feng; Chaoqun Niu; Chen Liu; Jie Du; Yong Chen
Journal:  Materials (Basel)       Date:  2018-11-29       Impact factor: 3.623

5.  Single-Step FRET-Based Detection of Femtomoles DNA.

Authors:  Kumar Sapkota; Anisa Kaur; Anoja Megalathan; Caleb Donkoh-Moore; Soma Dhakal
Journal:  Sensors (Basel)       Date:  2019-08-09       Impact factor: 3.576

Review 6.  Electrochemical Aptasensors Based on Hybrid Metal-Organic Frameworks.

Authors:  Gennady Evtugyn; Svetlana Belyakova; Anna Porfireva; Tibor Hianik
Journal:  Sensors (Basel)       Date:  2020-12-05       Impact factor: 3.576

7.  A Novel Fluorescent Biosensor for Adenosine Triphosphate Detection Based on a Metal⁻Organic Framework Coating Polydopamine Layer.

Authors:  Peipei Xu; Guangfu Liao
Journal:  Materials (Basel)       Date:  2018-09-05       Impact factor: 3.623

8.  A Label-Free Fluorescent AND Logic Gate Aptasensor for Sensitive ATP Detection.

Authors:  Jingjing Zhang; Chunzheng Yang; Chaoqun Niu; Chen Liu; Xuepin Cai; Jie Du; Yong Chen
Journal:  Sensors (Basel)       Date:  2018-09-29       Impact factor: 3.576

  8 in total

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