Literature DB >> 2764910

Testing transport models and transport data by means of kinetic rejection criteria.

R M Krupka1.   

Abstract

In the case of a transport system obeying Michaelis-Menten kinetics, completely general relationships are shown to exist between the final ratio of internal and external substrate concentrations, alpha, and the V/Km ratios found in zero-trans-entry, zero-trans-exit and equilibrium-exchange experiments (where V is a maximum substrate flux and Km a substrate half-saturation constant). The proof depends on a new method of derivation proceeding from the form of the experimental data rather than, as has been the practice in kinetic analysis, from a hypothetical reaction scheme. These general relationships, which will be true of all mechanisms giving rise to a particular type of behaviour (here Michaelis-Menten kinetics), provide a test for internal consistency in a set of experimental data. Other relationships, which are specific, can be derived from individual reaction schemes, with the use of traditional procedures in kinetic analysis. The specific relationships include constants for infinite trans entry and exit in addition to constants involved in the general relationships. In conjunction, the general and specific relationships provide a stringent test of mechanism. A set of results that fails to satisfy the general relationships must be rejected; here systematic error or unexpected changes in the transport system in different experiments may have distorted the calculated constants, or the system may not actually obey Michaelis-Menten kinetics. Results in accord with the general relationships, on the other hand, can be applied in specific tests of mechanism. The usefulness of the theorem is illustrated in the cases of the glucose-transport and choline-transport systems of erythrocytes. Experimental results taken from several studies in the literature, which were in accord with hyperbolic substrate kinetics, had previously been shown to disagree with relationships derived for the carrier model, and the model was rejected. The new analysis shows that the data violated the general relationships and therefore cannot decide the issue. More recent results on the glucose-transport system satisfy the general relations and agree with the carrier model.

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Year:  1989        PMID: 2764910      PMCID: PMC1138759          DOI: 10.1042/bj2600885

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  29 in total

1.  Infinite-cis kinetics support the carrier model for erythrocyte glucose transport.

Authors:  T J Wheeler; J D Whelan
Journal:  Biochemistry       Date:  1988-03-08       Impact factor: 3.162

2.  The kinetics of selective biological transport. IV. Assessment of three carrier systems using the erythrocyte-monosaccharide transport data.

Authors:  D M Miller
Journal:  Biophys J       Date:  1968-11       Impact factor: 4.033

3.  Rejection criterion for some forms of the conventional carrier.

Authors:  W R Leib; W D Stein
Journal:  J Theor Biol       Date:  1971-01       Impact factor: 2.691

4.  The membrane valve: a consequence of asymmetrical inhibition of membrane carriers. I. Equilibrating transport systems.

Authors:  R M Krupka; R Devés
Journal:  Biochim Biophys Acta       Date:  1979-01-05

5.  Kinetic tests of models for sugar transport in human erythrocytes and a comparison of fresh and cold-stored cells.

Authors:  M B Weiser; M Razin; W D Stein
Journal:  Biochim Biophys Acta       Date:  1983-01-19

6.  Kinetics of glucose transport in human erythrocytes.

Authors:  J Brahm
Journal:  J Physiol       Date:  1983-06       Impact factor: 5.182

7.  Evidence for negative cooperativity in human erythrocyte sugar transport.

Authors:  G D Holman; A L Busza; E J Pierce; W D Rees
Journal:  Biochim Biophys Acta       Date:  1981-12-21

8.  A general kinetic analysis of transport. Tests of the carrier model based on predicted relations among experimental parameters.

Authors:  R Devés; R M Krupka
Journal:  Biochim Biophys Acta       Date:  1979-10-05

9.  The kinetics of selective biological transport. II. Equations for induced uphill transport of sugars in human erythrocytes.

Authors:  D M Miller
Journal:  Biophys J       Date:  1965-07       Impact factor: 4.033

10.  The kinetics of glucose transport in human red blood cells.

Authors:  A G Lowe; A R Walmsley
Journal:  Biochim Biophys Acta       Date:  1986-05-28
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  4 in total

1.  The ligand binding site of the synaptosomal choline transporter: a provisional model based on inhibition studies.

Authors:  E Roberts; M Tamaru
Journal:  Neurochem Res       Date:  1992-05       Impact factor: 3.996

2.  Structured modelling of animal cells.

Authors:  C S Sanderson; P J Phillips; J P Barford
Journal:  Cytotechnology       Date:  1996-06       Impact factor: 2.058

3.  Biochemical basis for whole-cell uptake kinetics: specific affinity, oligotrophic capacity, and the meaning of the michaelis constant.

Authors:  D K Button
Journal:  Appl Environ Microbiol       Date:  1991-07       Impact factor: 4.792

4.  Alternating carrier models of asymmetric glucose transport violate the energy conservation laws.

Authors:  Richard J Naftalin
Journal:  Biophys J       Date:  2008-07-25       Impact factor: 4.033

  4 in total

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