Literature DB >> 27647891

Rotation of artificial rotor axles in rotary molecular motors.

Mihori Baba1, Kousuke Iwamoto2, Ryota Iino3, Hiroshi Ueno2, Mayu Hara2, Atsuko Nakanishi1, Jun-Ichi Kishikawa1, Hiroyuki Noji4, Ken Yokoyama5.   

Abstract

F1- and V1-ATPase are rotary molecular motors that convert chemical energy released upon ATP hydrolysis into torque to rotate a central rotor axle against the surrounding catalytic stator cylinder with high efficiency. How conformational change occurring in the stator is coupled to the rotary motion of the axle is the key unknown in the mechanism of rotary motors. Here, we generated chimeric motor proteins by inserting an exogenous rod protein, FliJ, into the stator ring of F1 or of V1 and tested the rotation properties of these chimeric motors. Both motors showed unidirectional and continuous rotation, despite no obvious homology in amino acid sequence between FliJ and the intrinsic rotor subunit of F1 or V1 These results showed that any residue-specific interactions between the stator and rotor are not a prerequisite for unidirectional rotation of both F1 and V1 The torque of chimeric motors estimated from viscous friction of the rotation probe against medium revealed that whereas the F1-FliJ chimera generates only 10% of WT F1, the V1-FliJ chimera generates torque comparable to that of V1 with the native axle protein that is structurally more similar to FliJ than the native rotor of F1 This suggests that the gross structural mismatch hinders smooth rotation of FliJ accompanied with the stator ring of F1.

Entities:  

Keywords:  ATPase; F1; V-ATPase; protein design; rotary molecular motor

Mesh:

Substances:

Year:  2016        PMID: 27647891      PMCID: PMC5056037          DOI: 10.1073/pnas.1605640113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Evidence for rotation of V1-ATPase.

Authors:  Hiromi Imamura; Masahiro Nakano; Hiroyuki Noji; Eiro Muneyuki; Shoji Ohkuma; Masasuke Yoshida; Ken Yokoyama
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-21       Impact factor: 11.205

2.  Inter-subunit interaction and quaternary rearrangement defined by the central stalk of prokaryotic V1-ATPase.

Authors:  Nobutaka Numoto; Yu Hasegawa; Kazuki Takeda; Kunio Miki
Journal:  EMBO Rep       Date:  2009-09-25       Impact factor: 8.807

3.  Key chemical factors of arginine finger catalysis of F1-ATPase clarified by an unnatural amino acid mutation.

Authors:  Ayako Yukawa; Ryota Iino; Rikiya Watanabe; Shigehiko Hayashi; Hiroyuki Noji
Journal:  Biochemistry       Date:  2014-12-30       Impact factor: 3.162

4.  Molecular dynamics simulations of yeast F1-ATPase before and after 16° rotation of the γ subunit.

Authors:  Yuko Ito; Takashi Yoshidome; Nobuyuki Matubayasi; Masahiro Kinoshita; Mitsunori Ikeguchi
Journal:  J Phys Chem B       Date:  2013-03-14       Impact factor: 2.991

5.  V-ATPase of Thermus thermophilus is inactivated during ATP hydrolysis but can synthesize ATP.

Authors:  K Yokoyama; E Muneyuki; T Amano; S Mizutani; M Yoshida; M Ishida; S Ohkuma
Journal:  J Biol Chem       Date:  1998-08-07       Impact factor: 5.157

6.  Role of the DELSEED loop in torque transmission of F1-ATPase.

Authors:  Mizue Tanigawara; Kazuhito V Tabata; Yuko Ito; Jotaro Ito; Rikiya Watanabe; Hiroshi Ueno; Mitsunori Ikeguchi; Hiroyuki Noji
Journal:  Biophys J       Date:  2012-09-05       Impact factor: 4.033

Review 7.  Rotation, structure, and classification of prokaryotic V-ATPase.

Authors:  Ken Yokoyama; Hiromi Imamura
Journal:  J Bioenerg Biomembr       Date:  2005-12       Impact factor: 3.853

8.  None of the rotor residues of F1-ATPase are essential for torque generation.

Authors:  Ryohei Chiwata; Ayako Kohori; Tomonari Kawakami; Katsuyuki Shiroguchi; Shou Furuike; Kengo Adachi; Kazuo Sutoh; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Biophys J       Date:  2014-05-20       Impact factor: 4.033

9.  Gold rotor bead tracking for high-speed measurements of DNA twist, torque and extension.

Authors:  Paul Lebel; Aakash Basu; Florian C Oberstrass; Elsa M Tretter; Zev Bryant
Journal:  Nat Methods       Date:  2014-02-23       Impact factor: 28.547

10.  Remote control of myosin and kinesin motors using light-activated gearshifting.

Authors:  Muneaki Nakamura; Lu Chen; Stuart C Howes; Tony D Schindler; Eva Nogales; Zev Bryant
Journal:  Nat Nanotechnol       Date:  2014-08-03       Impact factor: 39.213

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  4 in total

Review 1.  Multiscale molecular dynamics simulations of rotary motor proteins.

Authors:  Toru Ekimoto; Mitsunori Ikeguchi
Journal:  Biophys Rev       Date:  2017-12-04

Review 2.  Insight Into Distinct Functional Roles of the Flagellar ATPase Complex for Flagellar Assembly in Salmonella.

Authors:  Tohru Minamino; Miki Kinoshita; Keiichi Namba
Journal:  Front Microbiol       Date:  2022-05-04       Impact factor: 6.064

3.  Rotation Mechanism of Molecular Motor V1-ATPase Studied by Multiscale Molecular Dynamics Simulation.

Authors:  Yuta Isaka; Toru Ekimoto; Yuichi Kokabu; Ichiro Yamato; Takeshi Murata; Mitsunori Ikeguchi
Journal:  Biophys J       Date:  2017-03-14       Impact factor: 4.033

Review 4.  Catalytic robustness and torque generation of the F1-ATPase.

Authors:  Hiroyuki Noji; Hiroshi Ueno; Duncan G G McMillan
Journal:  Biophys Rev       Date:  2017-03-25
  4 in total

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