Literature DB >> 27639591

Evidence for epistatic interaction between VDR and SLC13A2 genes in the pathogenesis of hypocitraturia in recurrent calcium oxalate stone formers.

Domenico Rendina1, Gianpaolo De Filippo2, Fernando Gianfrancesco3, Riccardo Muscariello4, Michele Schiano di Cola4, Pasquale Strazzullo4, Teresa Esposito3,5.   

Abstract

BACKGROUND: Genetic factors play a key role in the pathogenesis of hypocitraturia, a common risk factor for nephrolithiasis. The Na+-dicarboxylate cotransporter NaDC1, encoded by the sodium-dicarboxylate cotransporter (SLC13A2) gene, is a major determinant of urinary citrate excretion and its biological functions are regulated also by the vitamin D/Vitamin D receptor (VDR) biological system. The aim of this case-control study was to evaluate the possible epistatic interaction between VDR rs731236and SLC13A2 rs11567842 allelic variants in the pathogenesis of hypocitraturia.
METHODS: Recurrent calcium-oxalate stone formers (SF) with or without hypocitraturia and healthy controls (C) were genotyped. Gene-gene interactions were estimated by the 1.0 software package of multifactor dimensionality reduction (MDR).
RESULTS: The prevalence of VDR TT and SLC13A2 GG genotypes was higher in hypocitraturic SF compared to C (odds ratio [OR] 3.24, 95 % confidence interval [CI] 1.38-7.60 for VDR TT vs. VDR tt and OR 4.06, 95 % CI 1.75-9.42 for SLC13A2 GG vs. SLC13A2 AA ). MDR analysis indicated a significant interaction between VDR TT and SLC13A2 GG in hypocitraturic SF compared to C [OR 3.81 (2.11-6.88)]. These data are compatible with an epistatic interaction between the VDR TT and SLC13A2 GG genotypes with a significant impact on the magnitude of the effect (suppressive effect).
CONCLUSIONS: These results point to an epistatic interaction between the VDR and the SLC13A2 alleles in the pathogenesis of idiopathic hypocitraturia in calcium-oxalate SF.

Entities:  

Keywords:  Epistasis; Hypocitraturia; Nephrolithiasis; SLC13A2; VDR

Mesh:

Substances:

Year:  2016        PMID: 27639591     DOI: 10.1007/s40620-016-0348-8

Source DB:  PubMed          Journal:  J Nephrol        ISSN: 1121-8428            Impact factor:   3.902


  32 in total

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Journal:  Hum Mol Genet       Date:  2002-10-01       Impact factor: 6.150

Review 2.  Low urinary citrate: an overview.

Authors:  Miriam Zacchia; Patricia Preisig
Journal:  J Nephrol       Date:  2010 Nov-Dec       Impact factor: 3.902

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Authors:  Ana M Pajor; Nina N Sun
Journal:  Am J Physiol Renal Physiol       Date:  2010-07-07

7.  Fourteen monogenic genes account for 15% of nephrolithiasis/nephrocalcinosis.

Authors:  Jan Halbritter; Michelle Baum; Ann Marie Hynes; Sarah J Rice; David T Thwaites; Zoran S Gucev; Brittany Fisher; Leslie Spaneas; Jonathan D Porath; Daniela A Braun; Ari J Wassner; Caleb P Nelson; Velibor Tasic; John A Sayer; Friedhelm Hildebrandt
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8.  Hypocitraturia in patients with gastrointestinal malabsorption.

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Journal:  N Engl J Med       Date:  1980-09-18       Impact factor: 91.245

9.  Association between vitamin D receptor gene polymorphisms and tubular citrate handling in calcium nephrolithiasis.

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Journal:  J Intern Med       Date:  2003-02       Impact factor: 8.989

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Journal:  Am J Med       Date:  1995-01       Impact factor: 4.965

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  3 in total

1.  Genetic Polymorphisms and Kidney Stones Around the Globe: A Systematic Review and Meta-Analysis.

Authors:  Abdolreza Mohammadi; Alireza Namazi Shabestari; Leila Zareian Baghdadabad; Fatemeh Khatami; Leonardo Oliveira Reis; Mahin Ahmadi Pishkuhi; Seyed Mohammad Kazem Aghamir
Journal:  Front Genet       Date:  2022-06-30       Impact factor: 4.772

2.  Genetic polymorphisms as prognostic factors for recurrent kidney stones: A systematic review and meta-analysis.

Authors:  Widi Atmoko; Putu Angga Risky Raharja; Ponco Birowo; Agus Rizal Ardy Hariandy Hamid; Akmal Taher; Nur Rasyid
Journal:  PLoS One       Date:  2021-05-06       Impact factor: 3.240

Review 3.  Idiopathic Osteoporosis and Nephrolithiasis: Two Sides of the Same Coin?

Authors:  Domenico Rendina; Gianpaolo De Filippo; Gabriella Iannuzzo; Veronica Abate; Pasquale Strazzullo; Alberto Falchetti
Journal:  Int J Mol Sci       Date:  2020-10-31       Impact factor: 5.923

  3 in total

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