Literature DB >> 27631502

Collision-Induced Dissociation of Electrosprayed NaCl Clusters: Using Molecular Dynamics Simulations to Visualize Reaction Cascades in the Gas Phase.

Tilo D Schachel1, Haidy Metwally1, Vlad Popa1, Lars Konermann2.   

Abstract

Infusion of NaCl solutions into an electrospray ionization (ESI) source produces [Na(n+1)Cl n ]+ and other gaseous clusters. The n = 4, 13, 22 magic number species have cuboid ground state structures and exhibit elevated abundance in ESI mass spectra. Relatively few details are known regarding the mechanisms whereby these clusters undergo collision-induced dissociation (CID). The current study examines to what extent molecular dynamics (MD) simulations can be used to garner insights into the sequence of events taking place during CID. Experiments on singly charged clusters reveal that the loss of small neutrals is the dominant fragmentation pathway. MD simulations indicate that the clusters undergo extensive structural fluctuations prior to decomposition. Consistent with the experimentally observed behavior, most of the simulated dissociation events culminate in ejection of small neutrals ([NaCl] i , with i = 1, 2, 3). The MD data reveal that the prevalence of these dissociation channels is linked to the presence of short-lived intermediates where a relatively compact core structure carries a small [NaCl] i protrusion. The latter can separate from the parent cluster via cleavage of a single Na-Cl contact. Fragmentation events of this type are kinetically favored over other dissociation channels that would require the quasi-simultaneous rupture of multiple electrostatic contacts. The CID behavior of NaCl cluster ions bears interesting analogies to that of collisionally activated protein complexes. Overall, it appears that MD simulations represent a valuable tool for deciphering the dissociation of noncovalently bound systems in the gas phase. Graphical Abstract ᅟ.

Entities:  

Keywords:  Charged residue model; Magic number; Reaction mechanism; Salt cluster; Transition state

Year:  2016        PMID: 27631502     DOI: 10.1007/s13361-016-1468-z

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  43 in total

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Authors:  R Juraschek; T Dülcks; M Karas
Journal:  J Am Soc Mass Spectrom       Date:  1999-04       Impact factor: 3.109

2.  Hydration energies in the gas phase of select (MX)mM+ ions, where M+ = Na+, K+, Rb+, Cs+, NH4+ and X- = F-, Cl-, Br-, I-, NO2-, NO3-. Observed magic numbers of (MX)mM+ ions and their possible significance.

Authors:  Arthur T Blades; Michael Peschke; Udo H Verkerk; Paul Kebarle
Journal:  J Am Chem Soc       Date:  2004-09-29       Impact factor: 15.419

3.  Ion-ion and ion-molecule reactions at the surface of proteins produced by nanospray. Information on the number of acidic residues and control of the number of ionized acidic and basic residues.

Authors:  Udo H Verkerk; Paul Kebarle
Journal:  J Am Soc Mass Spectrom       Date:  2005-08       Impact factor: 3.109

4.  Modulations in the abundance of salt clusters in electrosprays

Authors: 
Journal:  Anal Chem       Date:  2000-04-01       Impact factor: 6.986

5.  Comparison of collision- versus electron-induced dissociation of sodium chloride cluster cations.

Authors:  Linda Feketeová; Richard A J O'Hair
Journal:  Rapid Commun Mass Spectrom       Date:  2009-01       Impact factor: 2.419

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Authors:  P Hu; Q Z Ye; J A Loo
Journal:  Anal Chem       Date:  1994-12-01       Impact factor: 6.986

7.  Molecular Dynamics simulations of the electrospray process: formation of NaCl clusters via the charged residue mechanism.

Authors:  Lars Konermann; Robert G McAllister; Haidy Metwally
Journal:  J Phys Chem B       Date:  2014-10-02       Impact factor: 2.991

8.  A Charge Moving Algorithm for Molecular Dynamics Simulations of Gas-Phase Proteins.

Authors:  Sarah K Fegan; Mark Thachuk
Journal:  J Chem Theory Comput       Date:  2013-05-06       Impact factor: 6.006

9.  Improved side-chain torsion potentials for the Amber ff99SB protein force field.

Authors:  Kresten Lindorff-Larsen; Stefano Piana; Kim Palmo; Paul Maragakis; John L Klepeis; Ron O Dror; David E Shaw
Journal:  Proteins       Date:  2010-06

10.  A study of the hydration of the alkali metal ions in aqueous solution.

Authors:  Johan Mähler; Ingmar Persson
Journal:  Inorg Chem       Date:  2011-12-14       Impact factor: 5.165

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