Literature DB >> 27627344

Regulation of chain length in two diatoms as a growth-fragmentation process.

Marco Gherardi1,2,3, Alberto Amato4, Jean-Pierre Bouly3, Soizic Cheminant3, Maria Immacolata Ferrante4, Maurizio Ribera d'Alcalá4, Daniele Iudicone4, Angela Falciatore3,5, Marco Cosentino Lagomarsino3,5.   

Abstract

Chain formation in diatoms is relevant because of several aspects of their adaptation to the ecosystem. However, the tools to quantify the regulation of their assemblage and infer specific mechanisms in a laboratory setting are scarce. To address this problem, we define an approach based on a statistical physics model of chain growth and separation in combination with experimental evaluation of chain-length distributions. Applying this combined analysis to data from Chaetoceros decipiens and Phaeodactylum tricornutum, we find that cells of the first species control chain separation, likely through a cell-to-cell communication process, while the second species only modulates the separation rate. These results promote quantitative methods for characterizing chain formation in several chain-forming species and in diatoms in particular.

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Year:  2016        PMID: 27627344     DOI: 10.1103/PhysRevE.94.022418

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  5 in total

1.  Solvable Model for the Linear Separability of Structured Data.

Authors:  Marco Gherardi
Journal:  Entropy (Basel)       Date:  2021-03-04       Impact factor: 2.524

2.  Marine diatoms change their gene expression profile when exposed to microscale turbulence under nutrient replete conditions.

Authors:  Alberto Amato; Gianluca Dell'Aquila; Francesco Musacchia; Rossella Annunziata; Ari Ugarte; Nicolas Maillet; Alessandra Carbone; Maurizio Ribera d'Alcalà; Remo Sanges; Daniele Iudicone; Maria I Ferrante
Journal:  Sci Rep       Date:  2017-06-19       Impact factor: 4.379

3.  Nutrient consumption and chain tuning in diatoms exposed to storm-like turbulence.

Authors:  Gianluca Dell'Aquila; Maria I Ferrante; Marco Gherardi; Marco Cosentino Lagomarsino; Maurizio Ribera d'Alcalà; Daniele Iudicone; Alberto Amato
Journal:  Sci Rep       Date:  2017-05-12       Impact factor: 4.379

4.  Enchained growth and cluster dislocation: A possible mechanism for microbiota homeostasis.

Authors:  Florence Bansept; Kathrin Schumann-Moor; Médéric Diard; Wolf-Dietrich Hardt; Emma Slack; Claude Loverdo
Journal:  PLoS Comput Biol       Date:  2019-05-03       Impact factor: 4.475

5.  A Model-Driven Quantitative Analysis of Retrotransposon Distributions in the Human Genome.

Authors:  Andrea Riba; Maria Rita Fumagalli; Michele Caselle; Matteo Osella
Journal:  Genome Biol Evol       Date:  2020-11-03       Impact factor: 3.416

  5 in total

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