Literature DB >> 27626829

Structure of the Reduced Copper Active Site in Preprocessed Galactose Oxidase: Ligand Tuning for One-Electron O2 Activation in Cofactor Biogenesis.

Ryan E Cowley1, Jordi Cirera1, Munzarin F Qayyum1, Dalia Rokhsana2, Britt Hedman1,3, Keith O Hodgson1,3, David M Dooley2,4, Edward I Solomon1,3.   

Abstract

Galactose oxidase (GO) is a n class="Chemical">copper-dependent enzyme that accomplishes 2e- substrate oxidation by pairing a single copper with an unusual cysteinylated tyrosine (Cys-Tyr) redox cofactor. Previous studies have demonstrated that the post-translational biogenesis of Cys-Tyr is copper- and O2-dependent, resulting in a self-processing enzyme system. To investigate the mechanism of cofactor biogenesis in GO, the active-site structure of Cu(I)-loaded GO was determined using X-ray absorption near edge structure (XANES) and extended X-ray absorption fine structure (EXAFS) spectroscopy, and density-functional theory (DFT) calculations were performed on this model. Our results show that the active-site tyrosine lowers the Cu potential to enable the thermodynamically unfavorable 1e- reduction of O2, and the resulting Cu(II)-O2•- is activated toward H atom abstraction from cysteine. The final step of biogenesis is a concerted reaction involving coordinated Tyr ring deprotonation where Cu(II) coordination enables formation of the Cys-Tyr cross-link. These spectroscopic and computational results highlight the role of the Cu(I) in enabling O2 activation by 1e- and the role of the resulting Cu(II) in enabling substrate activation for biogenesis.

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Year:  2016        PMID: 27626829      PMCID: PMC5061629          DOI: 10.1021/jacs.6b05792

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  39 in total

1.  Dioxygen activation at a single copper site: structure, bonding, and mechanism of formation of 1:1 Cu-O2 adducts.

Authors:  Nermeen W Aboelella; Sergey V Kryatov; Benjamin F Gherman; William W Brennessel; Victor G Young; Ritimukta Sarangi; Elena V Rybak-Akimova; Keith O Hodgson; Britt Hedman; Edward I Solomon; Christopher J Cramer; William B Tolman
Journal:  J Am Chem Soc       Date:  2004-12-29       Impact factor: 15.419

2.  Cu(I)-dependent biogenesis of the galactose oxidase redox cofactor.

Authors:  Mei M Whittaker; James W Whittaker
Journal:  J Biol Chem       Date:  2003-04-01       Impact factor: 5.157

3.  A 1:1 copper-dioxygen adduct is an end-on bound superoxo copper(II) complex which undergoes oxygenation reactions with phenols.

Authors:  Debabrata Maiti; H Christopher Fry; Julia S Woertink; Michael A Vance; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2007-01-17       Impact factor: 15.419

4.  Electrochemical biosensing of galactose based on carbon materials: graphene versus multi-walled carbon nanotubes.

Authors:  Berna Dalkıran; Pınar Esra Erden; Esma Kılıç
Journal:  Anal Bioanal Chem       Date:  2016-04-13       Impact factor: 4.142

5.  The stacking tryptophan of galactose oxidase: a second-coordination sphere residue that has profound effects on tyrosyl radical behavior and enzyme catalysis.

Authors:  Melanie S Rogers; Ejan M Tyler; Nana Akyumani; Christian R Kurtis; R Kate Spooner; Sarah E Deacon; Sarita Tamber; Susan J Firbank; Khaled Mahmoud; Peter F Knowles; Simon E V Phillips; Michael J McPherson; David M Dooley
Journal:  Biochemistry       Date:  2007-03-27       Impact factor: 3.162

6.  The potential diagram for oxygen at pH 7.

Authors:  P M Wood
Journal:  Biochem J       Date:  1988-07-01       Impact factor: 3.857

7.  Active site models for the Cu(A) site of peptidylglycine α-hydroxylating monooxygenase and dopamine β-monooxygenase.

Authors:  Atsushi Kunishita; Mehmed Z Ertem; Yuri Okubo; Tetsuro Tano; Hideki Sugimoto; Kei Ohkubo; Nobutaka Fujieda; Shunichi Fukuzumi; Christopher J Cramer; Shinobu Itoh
Journal:  Inorg Chem       Date:  2012-08-21       Impact factor: 5.165

8.  Spectroscopic and electronic structure studies of the diamagnetic side-on CuII-superoxo complex Cu(O2)[HB(3-R-5-iPrpz)3]: antiferromagnetic coupling versus covalent delocalization.

Authors:  Peng Chen; David E Root; Cecelia Campochiaro; Kiyoshi Fujisawa; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2003-01-15       Impact factor: 15.419

9.  Structure-function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family.

Authors:  DeLu Tyler Yin; Saioa Urresti; Mickael Lafond; Esther M Johnston; Fatemeh Derikvand; Luisa Ciano; Jean-Guy Berrin; Bernard Henrissat; Paul H Walton; Gideon J Davies; Harry Brumer
Journal:  Nat Commun       Date:  2015-12-18       Impact factor: 14.919

10.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
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  10 in total

1.  Intramolecular Hydrogen Bonding Enhances Stability and Reactivity of Mononuclear Cupric Superoxide Complexes.

Authors:  Mayukh Bhadra; Jung Yoon C Lee; Ryan E Cowley; Sunghee Kim; Maxime A Siegler; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2018-07-13       Impact factor: 15.419

Review 2.  Activation of dioxygen by copper metalloproteins and insights from model complexes.

Authors:  David A Quist; Daniel E Diaz; Jeffrey J Liu; Kenneth D Karlin
Journal:  J Biol Inorg Chem       Date:  2016-12-05       Impact factor: 3.358

3.  Stabilizing a NiII-aqua complex via intramolecular hydrogen bonds: synthesis, structure, and redox properties.

Authors:  Deborah Brazzolotto; Justin A Bogart; Dolores L Ross; Joseph W Ziller; A S Borovik
Journal:  Inorganica Chim Acta       Date:  2019-06-13       Impact factor: 2.545

4.  Kβ X-ray Emission Spectroscopy as a Probe of Cu(I) Sites: Application to the Cu(I) Site in Preprocessed Galactose Oxidase.

Authors:  Hyeongtaek Lim; Michael L Baker; Ryan E Cowley; Sunghee Kim; Mayukh Bhadra; Maxime A Siegler; Thomas Kroll; Dimosthenis Sokaras; Tsu-Chien Weng; Dalia R Biswas; David M Dooley; Kenneth D Karlin; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  Inorg Chem       Date:  2020-11-02       Impact factor: 5.165

5.  Formation of Monofluorinated Radical Cofactor in Galactose Oxidase through Copper-Mediated C-F Bond Scission.

Authors:  Jiasong Li; Ian Davis; Wendell P Griffith; Aimin Liu
Journal:  J Am Chem Soc       Date:  2020-10-22       Impact factor: 15.419

Review 6.  Oxygen Activation by Cu LPMOs in Recalcitrant Carbohydrate Polysaccharide Conversion to Monomer Sugars.

Authors:  Katlyn K Meier; Stephen M Jones; Thijs Kaper; Henrik Hansson; Martijn J Koetsier; Saeid Karkehabadi; Edward I Solomon; Mats Sandgren; Bradley Kelemen
Journal:  Chem Rev       Date:  2017-11-20       Impact factor: 60.622

7.  Harnessing the active site triad: merging hemilability, proton responsivity, and ligand-based redox-activity.

Authors:  Douglas F Baumgardner; Wyatt E Parks; John D Gilbertson
Journal:  Dalton Trans       Date:  2020-01-07       Impact factor: 4.390

8.  Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.

Authors:  Jiasong Li; Wendell P Griffith; Ian Davis; Inchul Shin; Jiangyun Wang; Fahui Li; Yifan Wang; Daniel J Wherritt; Aimin Liu
Journal:  Nat Chem Biol       Date:  2018-06-25       Impact factor: 15.040

9.  A Thioether-Ligated Cupric Superoxide Model with Hydrogen Atom Abstraction Reactivity.

Authors:  Mayukh Bhadra; Wesley J Transue; Hyeongtaek Lim; Ryan E Cowley; Jung Yoon C Lee; Maxime A Siegler; Patrick Josephs; Gerald Henkel; Markus Lerch; Siegfried Schindler; Adam Neuba; Keith O Hodgson; Britt Hedman; Edward I Solomon; Kenneth D Karlin
Journal:  J Am Chem Soc       Date:  2021-03-08       Impact factor: 15.419

10.  Identification of key structural features of the elusive Cu-Aβ complex that generates ROS in Alzheimer's disease.

Authors:  Clémence Cheignon; Megan Jones; Elena Atrián-Blasco; Isabelle Kieffer; Peter Faller; Fabrice Collin; Christelle Hureau
Journal:  Chem Sci       Date:  2017-05-04       Impact factor: 9.825

  10 in total

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