Literature DB >> 27625199

Methods of epigenome editing for probing the function of genomic imprinting.

Kira DA Rienecker1, Matthew J Hill1, Anthony R Isles1.   

Abstract

The curious patterns of imprinted gene expression draw interest from several scientific disciplines to the functional consequences of genomic imprinting. Methods of probing the function of imprinting itself have largely been indirect and correlational, relying heavily on conventional transgenics. Recently, the burgeoning field of epigenome editing has provided new tools and suggested strategies for asking causal questions with site specificity. This perspective article aims to outline how these new methods may be applied to questions of functional imprinting and, with this aim in mind, to suggest new dimensions for the expansion of these epigenome-editing tools.

Keywords:  CRISPR-Cas9; EpiEffectors; epigenome editing; functional consequences; imprinting

Mesh:

Year:  2016        PMID: 27625199      PMCID: PMC5066122          DOI: 10.2217/epi-2016-0073

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  45 in total

1.  Deletion of the H19 transcription unit reveals the existence of a putative imprinting control element.

Authors:  M A Ripoche; C Kress; F Poirier; L Dandolo
Journal:  Genes Dev       Date:  1997-06-15       Impact factor: 11.361

Review 2.  Developmental regulation of somatic imprints.

Authors:  Rosalind M John; Louis Lefebvre
Journal:  Differentiation       Date:  2011-02-11       Impact factor: 3.880

Review 3.  Genomic imprinting in the brain.

Authors:  E B Keverne
Journal:  Curr Opin Neurobiol       Date:  1997-08       Impact factor: 6.627

Review 4.  Dosage-sensitivity of imprinted genes expressed in the brain: 15q11-q13 and neuropsychiatric illness.

Authors:  Gráinne I McNamara; Anthony R Isles
Journal:  Biochem Soc Trans       Date:  2013-06       Impact factor: 5.407

Review 5.  Genomic imprinting mechanisms in mammals.

Authors:  Folami Y Ideraabdullah; Sebastien Vigneau; Marisa S Bartolomei
Journal:  Mutat Res       Date:  2008-08-20       Impact factor: 2.433

6.  A mono-allelic bivalent chromatin domain controls tissue-specific imprinting at Grb10.

Authors:  Lionel A Sanz; Stormy Chamberlain; Jean-Charles Sabourin; Amandine Henckel; Terry Magnuson; Jean-Philippe Hugnot; Robert Feil; Philippe Arnaud
Journal:  EMBO J       Date:  2008-07-24       Impact factor: 11.598

Review 7.  Use of epigenetic drugs in disease: an overview.

Authors:  Sarah Heerboth; Karolina Lapinska; Nicole Snyder; Meghan Leary; Sarah Rollinson; Sibaji Sarkar
Journal:  Genet Epigenet       Date:  2014-05-27

8.  The imprinted Phlda2 gene modulates a major endocrine compartment of the placenta to regulate placental demands for maternal resources.

Authors:  S J Tunster; H D J Creeth; R M John
Journal:  Dev Biol       Date:  2015-10-23       Impact factor: 3.582

9.  Postnatal survival of mice with maternal duplication of distal chromosome 7 induced by a Igf2/H19 imprinting control region lacking insulator function.

Authors:  Li Han; Piroska E Szabó; Jeffrey R Mann
Journal:  PLoS Genet       Date:  2010-01-08       Impact factor: 5.917

10.  RNA-guided gene activation by CRISPR-Cas9-based transcription factors.

Authors:  Pablo Perez-Pinera; D Dewran Kocak; Christopher M Vockley; Andrew F Adler; Ami M Kabadi; Lauren R Polstein; Pratiksha I Thakore; Katherine A Glass; David G Ousterout; Kam W Leong; Farshid Guilak; Gregory E Crawford; Timothy E Reddy; Charles A Gersbach
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547

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  1 in total

1.  Epigenetic Inheritance: Concepts, Mechanisms and Perspectives.

Authors:  Irene Lacal; Rossella Ventura
Journal:  Front Mol Neurosci       Date:  2018-09-28       Impact factor: 5.639

  1 in total

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