Literature DB >> 27622394

Connectivity-based change point detection for large-size functional networks.

Seok-Oh Jeong1, Chongwon Pae2, Hae-Jeong Park3.   

Abstract

Recent understanding that the brain at rest does not remain in a single state but transiently visits multiple states emphasizes the importance of state changes embedded in the brain network. Due to the effectiveness of larger networks in characterizing brain states, there is an increasing need for a network-based change point detection method that is applicable to large-size networks, particularly those with longer time series. This paper presents a fast and efficient method for detecting change points in the large-size functional networks of resting-state fMRI. To detect change points, a statistic for the covariance change at each time point is tested by a local false discovery rate, estimated based on the empirical null principle using a semiparametric mixture model. We present simulations and empirical analyses of task-based and resting-state fMRI data sets with various network sizes up to 300 nodes selected from the Human Connectome Project database. We demonstrate that the proposed method is not only efficient in detecting change points in large samples of large-size networks but also is less sensitive to the window size selection and provides the consequent identification of the changed edges. The covariance-based change point detection method in this study would be very useful in exploring characteristics of dynamic states in long-term large-size resting-state brain networks. Copyright Â
© 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27622394     DOI: 10.1016/j.neuroimage.2016.09.019

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  10 in total

1.  Brain-State Extraction Algorithm Based on the State Transition (BEST): A Dynamic Functional Brain Network Analysis in fMRI Study.

Authors:  Young-Beom Lee; Kwangsun Yoo; Jee Hoon Roh; Won-Jin Moon; Yong Jeong
Journal:  Brain Topogr       Date:  2019-06-03       Impact factor: 3.020

Review 2.  Resting-State Functional Connectivity in the Human Connectome Project: Current Status and Relevance to Understanding Psychopathology.

Authors:  Deanna M Barch
Journal:  Harv Rev Psychiatry       Date:  2017 Sep/Oct       Impact factor: 3.732

3.  Identification of Temporal Transition of Functional States Using Recurrent Neural Networks from Functional MRI.

Authors:  Hongming Li; Yong Fan
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

4.  Geometric learning of functional brain network on the correlation manifold.

Authors:  Kisung You; Hae-Jeong Park
Journal:  Sci Rep       Date:  2022-10-22       Impact factor: 4.996

Review 5.  Methods and Considerations for Dynamic Analysis of Functional MR Imaging Data.

Authors:  Jingyuan E Chen; Mikail Rubinov; Catie Chang
Journal:  Neuroimaging Clin N Am       Date:  2017-09-01       Impact factor: 2.264

6.  State-Dependent Effective Connectivity in Resting-State fMRI.

Authors:  Hae-Jeong Park; Jinseok Eo; Chongwon Pae; Junho Son; Sung Min Park; Jiyoung Kang
Journal:  Front Neural Circuits       Date:  2021-10-27       Impact factor: 3.492

7.  Identification of community structure-based brain states and transitions using functional MRI.

Authors:  Lingbin Bian; Tiangang Cui; B T Thomas Yeo; Alex Fornito; Adeel Razi; Jonathan Keith
Journal:  Neuroimage       Date:  2021-10-05       Impact factor: 6.556

8.  Dynamic effective connectivity in resting state fMRI.

Authors:  Hae-Jeong Park; Karl J Friston; Chongwon Pae; Bumhee Park; Adeel Razi
Journal:  Neuroimage       Date:  2017-11-20       Impact factor: 6.556

9.  Graph-theoretical analysis for energy landscape reveals the organization of state transitions in the resting-state human cerebral cortex.

Authors:  Jiyoung Kang; Chongwon Pae; Hae-Jeong Park
Journal:  PLoS One       Date:  2019-09-09       Impact factor: 3.240

10.  Bayesian estimation of maximum entropy model for individualized energy landscape analysis of brain state dynamics.

Authors:  Jiyoung Kang; Seok-Oh Jeong; Chongwon Pae; Hae-Jeong Park
Journal:  Hum Brain Mapp       Date:  2021-05-02       Impact factor: 5.038

  10 in total

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