Literature DB >> 27621057

Transcriptomic response of Drosophila melanogaster pupae developed in hypergravity.

Shannon Hateley1, Ravikumar Hosamani2, Shilpa R Bhardwaj3, Lior Pachter4, Sharmila Bhattacharya5.   

Abstract

Altered gravity can perturb normal development and induce corresponding changes in gene expression. Understanding this relationship between the physical environment and a biological response is important for NASA's space travel goals. We use RNA-Seq and qRT-PCR techniques to profile changes in early Drosophila melanogaster pupae exposed to chronic hypergravity (3g, or three times Earth's gravity). During the pupal stage, D. melanogaster rely upon gravitational cues for proper development. Assessing gene expression changes in the pupae under altered gravity conditions helps highlight gravity-dependent genetic pathways. A robust transcriptional response was observed in hypergravity-treated pupae compared to controls, with 1513 genes showing a significant (q<0.05) difference in gene expression. Five major biological processes were affected: ion transport, redox homeostasis, immune response, proteolysis, and cuticle development. This outlines the underlying molecular and biological changes occurring in Drosophila pupae in response to hypergravity; gravity is important for many biological processes on Earth. Published by Elsevier Inc.

Entities:  

Keywords:  Drosophila melanogaster; Hypergravity; Metamorphosis; Pupae; RNA-Seq; Transcriptome

Mesh:

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Year:  2016        PMID: 27621057     DOI: 10.1016/j.ygeno.2016.09.002

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  4 in total

1.  Asparagine biosynthesis as a mechanism of increased host lethality induced by Serratia marcescens in simulated microgravity environments.

Authors:  Rachel Gilbert; Nicole Tanenbaum; Sharmila Bhattacharya
Journal:  Heliyon       Date:  2022-05-04

2.  mmquant: how to count multi-mapping reads?

Authors:  Matthias Zytnicki
Journal:  BMC Bioinformatics       Date:  2017-09-15       Impact factor: 3.169

Review 3.  Space omics research in Europe: Contributions, geographical distribution and ESA member state funding schemes.

Authors:  Colleen S Deane; Willian A da Silveira; Raúl Herranz
Journal:  iScience       Date:  2022-02-15

4.  Novel hypergravity treatment enhances root phenotype and positively influences physio-biochemical parameters in bread wheat (Triticum aestivum L.).

Authors:  Basavalingayya K Swamy; Ravikumar Hosamani; Malarvizhi Sathasivam; S S Chandrashekhar; Uday G Reddy; Narayan Moger
Journal:  Sci Rep       Date:  2021-07-27       Impact factor: 4.379

  4 in total

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