Literature DB >> 27616803

Phylogeny and taxonomic revision of Microascaceae with emphasis on synnematous fungi.

M Sandoval-Denis1, J Guarro2, J F Cano-Lira2, D A Sutton3, N P Wiederhold3, G S de Hoog4, S P Abbott5, C Decock6, L Sigler7, J Gené2.   

Abstract

The taxonomy of the synnematous genera Cephalotrichum, Doratomyces and Trichurus, and other related genera Gamsia, Wardomyces and Wardomycopsis, has been controversial and relies mainly on morphological criteria. These are microascaceous saprobic fungi mostly found in air and soil and with a worldwide distribution. In order to clarify their taxonomy and to delineate generic boundaries within the Microascaceae, we studied 57 isolates that include clinical, environmental and all the available ex-type strains of a large set of species by means of morphological, physiological and molecular phylogenetic analyses using DNA sequence data of four loci (the ITS region, and fragments of rDNA LSU, translation elongation factor 1α and β-tubulin). The results demonstrate that Cephalotrichum, Doratomyces and Trichurus are congeneric and the genus Cephalotrichum is accepted here with Echinobotryum as a further synonym. The genera Acaulium and Fairmania, typified by A. albonigrescens and F. singularis, respectively, are distinct from Microascus and Scopulariopsis, Gamsia is distinct from Wardomyces, and Wardomycopsis is confirmed as a separate genus in the Microascaceae. Two new species of Cephalotrichum are described as C. brevistipitatum and C. hinnuleum. Nine new combinations are proposed, i.e. Acaulium acremonium, A. caviariforme, Cephalotrichum asperulum, C. columnare, C. cylindricum, C. dendrocephalum, C. gorgonifer, Gamsia columbina and Wardomyces giganteus. A neotype is designed for C. stemonitis. Lectotypes and epitypes are designated for A. acremonium, A. albonigrescens, C. gorgonifer, C. nanum and W. anomalus. Cephalotrichum cylindricum, C. microsporum, F. singularis and Gamsia columbina are also epitypified with new specimens. Descriptions of the phenotypic features and dichotomous keys for identification are provided for accepted species in the different genera.

Entities:  

Keywords:  Acaulium acremonium (Delacr.) Sandoval-Denis, Guarro & Gené; Acaulium albonigrescens Sopp; Acaulium caviariforme (Malloch & Hubart) Sandoval-Denis, Guarro & Gené; Cephalotrichum; Cephalotrichum asperulum (J.E. Wright & S. Marchand) Sandoval-Denis, Guarro & Gené; Cephalotrichum brevistipitatum Sandoval-Denis, Guarro & Gené; Cephalotrichum columnare (H.J. Swart) S.P. Abbott; Cephalotrichum cylindricum (Clem. & Shear) S. P. Abbott; Cephalotrichum dendrocephalum (Udagawa, Y. Horie & Abdullah) S.P. Abbott; Cephalotrichum gorgonifer (Bainier) Sandoval-Denis, Gené & Guarro; Cephalotrichum hinnuleum Sandoval-Denis, Guarro & Gené; Doratomyces; Fairmania singularis Sacc.; Gamsia; Gamsia columbina (Demelius) Sandoval-Denis, Guarro & Gené; Isaria stemonitis Pers.: Fr.; Microascales; Monilia acremonium Delacr.; Multigene phylogeny; Periconia nana Ehrenb.; Stysanus microsporus Sacc.; Taxonomy; Trichosporum columbinum Demelius; Trichurus; Trichurus cylindricus Clem. & Shear; Trichurus gorgonifer Bainier; Wardomyces; Wardomyces anomalus F.T. Brooks & Hansf.; Wardomyces giganteus (Malloch) Sandoval-Denis, Guarro & Gené; Wardomycopsis

Year:  2016        PMID: 27616803      PMCID: PMC5007882          DOI: 10.1016/j.simyco.2016.07.002

Source DB:  PubMed          Journal:  Stud Mycol        ISSN: 0166-0616            Impact factor:   16.097


  17 in total

1.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

2.  Scopulariopsis, a poorly known opportunistic fungus: spectrum of species in clinical samples and in vitro responses to antifungal drugs.

Authors:  Marcelo Sandoval-Denis; Deanna A Sutton; Annette W Fothergill; Josep Cano-Lira; Josepa Gené; C A Decock; G S de Hoog; Josep Guarro
Journal:  J Clin Microbiol       Date:  2013-09-11       Impact factor: 5.948

3.  Keratinase of Doratomyces microsporus.

Authors:  H Gradisar; S Kern; J Friedrich
Journal:  Appl Microbiol Biotechnol       Date:  2000-02       Impact factor: 4.813

4.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

5.  A without-prejudice list of generic names of fungi for protection under the International Code of Nomenclature for algae, fungi, and plants.

Authors:  Paul M Kirk; Joost A Stalpers; Uwe Braun; Pedro W Crous; Karen Hansen; David L Hawksworth; Kevin D Hyde; Robert Lücking; Thorsten H Lumbsch; Amy Y Rossman; Keith A Seifert; Mark Stadler
Journal:  IMA Fungus       Date:  2013-12-18       Impact factor: 3.515

6.  Relationships of Scopulariopsis based on LSU rDNA sequences.

Authors:  J Issakainen; J Jalava; J Hyvönen; N Sahlberg; T Pirnes; C K Campbell
Journal:  Med Mycol       Date:  2003-02       Impact factor: 4.076

7.  Ancient and recent patterns of geographic speciation in the oyster mushroom Pleurotus revealed by phylogenetic analysis of ribosomal DNA sequences.

Authors:  R Vilgalys; B L Sun
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

8.  A Beauveria phylogeny inferred from nuclear ITS and EF1-alpha sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs.

Authors:  Stephen A Rehner; Ellen Buckley
Journal:  Mycologia       Date:  2005 Jan-Feb       Impact factor: 2.696

9.  Molecular taxonomy of scopulariopsis-like fungi with description of new clinical and environmental species.

Authors:  Tomasz Jagielski; Marcelo Sandoval-Denis; Jin Yu; Limin Yao; Zofia Bakuła; Joanna Kalita; Magdalena Skóra; Paweł Krzyściak; G Sybren de Hoog; Josep Guarro; Josepa Gené
Journal:  Fungal Biol       Date:  2016-02-03

10.  Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species.

Authors:  R Vilgalys; M Hester
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

View more
  8 in total

1.  Fungal Planet description sheets: 625-715.

Authors:  P W Crous; M J Wingfield; T I Burgess; A J Carnegie; G E St J Hardy; D Smith; B A Summerell; J F Cano-Lira; J Guarro; J Houbraken; L Lombard; M P Martín; M Sandoval-Denis; A V Alexandrova; C W Barnes; I G Baseia; J D P Bezerra; V Guarnaccia; T W May; M Hernández-Restrepo; A M Stchigel; A N Miller; M E Ordoñez; V P Abreu; T Accioly; C Agnello; A Agustin Colmán; C C Albuquerque; D S Alfredo; P Alvarado; G R Araújo-Magalhães; S Arauzo; T Atkinson; A Barili; R W Barreto; J L Bezerra; T S Cabral; F Camello Rodríguez; R H S F Cruz; P P Daniëls; B D B da Silva; D A C de Almeida; A A de Carvalho Júnior; C A Decock; L Delgat; S Denman; R A Dimitrov; J Edwards; A G Fedosova; R J Ferreira; A L Firmino; J A Flores; D García; J Gené; A Giraldo; J S Góis; A A M Gomes; C M Gonçalves; D E Gouliamova; M Groenewald; B V Guéorguiev; M Guevara-Suarez; L F P Gusmão; K Hosaka; V Hubka; S M Huhndorf; M Jadan; Ž Jurjević; B Kraak; V Kučera; T K A Kumar; I Kušan; S R Lacerda; S Lamlertthon; W S Lisboa; M Loizides; J J Luangsa-Ard; P Lysková; W P Mac Cormack; D M Macedo; A R Machado; E F Malysheva; P Marinho; N Matočec; M Meijer; A Mešić; S Mongkolsamrit; K A Moreira; O V Morozova; K U Nair; N Nakamura; W Noisripoom; I Olariaga; R J V Oliveira; L M Paiva; P Pawar; O L Pereira; S W Peterson; M Prieto; E Rodríguez-Andrade; C Rojo De Blas; M Roy; E S Santos; R Sharma; G A Silva; C M Souza-Motta; Y Takeuchi-Kaneko; C Tanaka; A Thakur; M Th Smith; Z Tkalčec; N Valenzuela-Lopez; P van der Kleij; A Verbeken; M G Viana; X W Wang; J Z Groenewald
Journal:  Persoonia       Date:  2017-12-20       Impact factor: 11.051

Review 2.  Fungal Olecranon Bursitis in an Immunocompetent Patient by Knoxdaviesia dimorphospora sp. nov.: Case Report and Review.

Authors:  Marcela Guevara-Suarez; Marta Llaurado; Isabel Pujol; Emilio Mayayo; Adela Martin-Vicente; Josepa Gené
Journal:  Mycopathologia       Date:  2017-10-09       Impact factor: 2.574

3.  The genomic study of an environmental isolate of Scedosporium apiospermum shows its metabolic potential to degrade hydrocarbons.

Authors:  Laura T Morales; Laura N González-García; María C Orozco; Silvia Restrepo; Martha J Vives
Journal:  Stand Genomic Sci       Date:  2017-12-04

4.  Phylogeny and taxonomic revision of Kernia and Acaulium.

Authors:  Lei Su; Hua Zhu; Yongchun Niu; Yaxi Guo; Xiaopeng Du; Jianguo Guo; Ling Zhang; Chuan Qin
Journal:  Sci Rep       Date:  2020-06-25       Impact factor: 4.379

5.  Cephalotrichum and related synnematous fungi with notes on species from the built environment.

Authors:  J H C Woudenberg; M Sandoval-Denis; J Houbraken; K A Seifert; R A Samson
Journal:  Stud Mycol       Date:  2017-09-21       Impact factor: 16.097

6.  A New Species of Thelonectria and a New Record of Cephalotrichum hinnuleum from Gunwi and Ulleungdo in Korea.

Authors:  Kallol Das; Young-Hyun You; Seung-Yeol Lee; Hee-Young Jung
Journal:  Mycobiology       Date:  2020-09-08       Impact factor: 1.858

7.  First Report of an Invasive Infection by Cephalotrichum gorgonifer in a Neutropenic Patient with Hematological Malignancy under Chemotherapy.

Authors:  Ana Álvarez-Uría; Pilar Escribano; Verónica Parra-Blanco; José Francisco Cano-Lira; Alberto Miguel Stchigel; Gillen Oarbeascoa; Patricia Muñoz; Jesús Guinea
Journal:  J Fungi (Basel)       Date:  2021-12-17

8.  Soil Rehabilitation Promotes Resilient Microbiome with Enriched Keystone Taxa than Agricultural Infestation in Barren Soils on the Loess Plateau.

Authors:  Dong Liu; Parag Bhople; Katharina Maria Keiblinger; Baorong Wang; Shaoshan An; Nan Yang; Caspar C C Chater; Fuqiang Yu
Journal:  Biology (Basel)       Date:  2021-12-02
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.