Literature DB >> 27613080

Pineapple Genome: A Reference for Monocots and CAM Photosynthesis.

Ray Ming1, Ching Man Wai2, Romain Guyot3.   

Abstract

Pineapple occupies an important phylogenetic position and its reference genome expedites genomic research within the family Bromeliaceae and more widely among monocots. One such research focus is the evolution of crassulacean acid metabolism (CAM) photosynthesis. Acquiring circadian clock cis-regulatory elements in CAM-related genes might be a critical step in the evolution of this form of photosynthesis. Follow-up studies will clarify the processes and evolutionary forces leading to the multiple independent origins of CAM photosynthesis within the family Bromeliaceae and in over 400 genera across 36 families.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID： 27613080     DOI： 10.1016/j.tig.2016.08.008

Source DB:  PubMed          Journal:  Trends Genet        ISSN： 0168-9525            Impact factor:   11.639


  11 in total

Review 1.  The role of cis-elements in the evolution of crassulacean acid metabolism photosynthesis.

Authors:  Li-Yu Chen; Yinghui Xin; Ching Man Wai; Juan Liu; Ray Ming
Journal:  Hortic Res       Date:  2020-01-01       Impact factor: 6.793

2.  Genome-wide organization and expression profiling of the R2R3-MYB transcription factor family in pineapple (Ananas comosus).

Authors:  Chaoyang Liu; Tao Xie; Chenjie Chen; Aiping Luan; Jianmei Long; Chuhao Li; Yaqi Ding; Yehua He
Journal:  BMC Genomics       Date:  2017-07-01       Impact factor: 3.969

3.  Genome-wide investigation of WRKY gene family in pineapple: evolution and expression profiles during development and stress.

Authors:  Tao Xie; Chengjie Chen; Chuhao Li; Jiarou Liu; Chaoyang Liu; Yehua He
Journal:  BMC Genomics       Date:  2018-06-25       Impact factor: 3.969

4.  Identification of SWI2/SNF2-Related 1 Chromatin Remodeling Complex (SWR1-C) Subunits in Pineapple and the Role of Pineapple SWR1 COMPLEX 6 (AcSWC6) in Biotic and Abiotic Stress Response.

Authors:  Bello Hassan Jakada; Mohammad Aslam; Beenish Fakher; Joseph G Greaves; Zeyun Li; Weimin Li; Linyi Lai; Oyekunle Adenike Ayoade; Yan Cheng; Shijiang Cao; Gang Li; Jer-Ming Hu; Yuan Qin
Journal:  Biomolecules       Date:  2019-08-13

5.  Crassulacean Acid Metabolism Abiotic Stress-Responsive Transcription Factors: a Potential Genetic Engineering Approach for Improving Crop Tolerance to Abiotic Stress.

Authors:  Atia B Amin; Kumudu N Rathnayake; Won C Yim; Travis M Garcia; Beate Wone; John C Cushman; Bernard W M Wone
Journal:  Front Plant Sci       Date:  2019-02-22       Impact factor: 5.753

6.  Genome-Wide Identification and Expression Profiling of CBL-CIPK Gene Family in Pineapple (Ananas comosus) and the Role of AcCBL1 in Abiotic and Biotic Stress Response.

Authors:  Mohammad Aslam; Beenish Fakher; Bello Hassan Jakada; Lihua Zhao; Shijiang Cao; Yan Cheng; Yuan Qin
Journal:  Biomolecules       Date:  2019-07-20

7.  The low-copy nuclear gene Agt1 as a novel DNA barcoding marker for Bromeliaceae.

Authors:  Fabian Bratzel; Sascha Heller; Nadine Cyrannek; Juraj Paule; Elton M C Leme; Anna Loreth; Annika Nowotny; Markus Kiefer; Walter Till; Michael H J Barfuss; Christian Lexer; Marcus A Koch; Georg Zizka
Journal:  BMC Plant Biol       Date:  2020-03-12       Impact factor: 4.215

Review 8.  Starch branching enzymes as putative determinants of postharvest quality in horticultural crops.

Authors:  Jingwei Yu; Keyun Wang; Diane M Beckles
Journal:  BMC Plant Biol       Date:  2021-10-21       Impact factor: 4.215

9.  Structural and Functional Annotation of Transposable Elements Revealed a Potential Regulation of Genes Involved in Rubber Biosynthesis by TE-Derived siRNA Interference in Hevea brasiliensis.

Authors:  Shuangyang Wu; Romain Guyot; Stéphanie Bocs; Gaëtan Droc; Fetrina Oktavia; Songnian Hu; Chaorong Tang; Pascal Montoro; Julie Leclercq
Journal:  Int J Mol Sci       Date:  2020-06-13       Impact factor: 5.923

Review 10.  The role of cis-elements in the evolution of crassulacean acid metabolism photosynthesis.

Authors:  Li-Yu Chen; Yinghui Xin; Ching Man Wai; Juan Liu; Ray Ming
Journal:  Hortic Res       Date:  2020-01-01       Impact factor: 6.793
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