Literature DB >> 27610578

Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape.

Ronan C O'Malley, Shao-Shan Carol Huang, Liang Song, Mathew G Lewsey, Anna Bartlett, Joseph R Nery, Mary Galli, Andrea Gallavotti, Joseph R Ecker.   

Abstract

Year:  2016        PMID： 27610578     DOI： 10.1016/j.cell.2016.08.063

Source DB:  PubMed          Journal:  Cell        ISSN： 0092-8674            Impact factor:   41.582


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  65 in total

1.  Prediction of condition-specific regulatory genes using machine learning.

Authors:  Qi Song; Jiyoung Lee; Shamima Akter; Matthew Rogers; Ruth Grene; Song Li
Journal:  Nucleic Acids Res       Date:  2020-06-19       Impact factor: 16.971

2.  The histone variant H2A.Z and chromatin remodeler BRAHMA act coordinately and antagonistically to regulate transcription and nucleosome dynamics in Arabidopsis.

Authors:  E Shannon Torres; Roger B Deal
Journal:  Plant J       Date:  2019-03-19       Impact factor: 6.417

3.  The Arabidopsis GRAS-type SCL28 transcription factor controls the mitotic cell cycle and division plane orientation.

Authors:  Camila Goldy; José-Antonio Pedroza-Garcia; Natalie Breakfield; Toon Cools; Rodrigo Vena; Philip N Benfey; Lieven De Veylder; Javier Palatnik; Ramiro E Rodriguez
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

4.  The AP2/ERF Transcription Factor TINY Modulates Brassinosteroid-Regulated Plant Growth and Drought Responses in Arabidopsis.

Authors:  Zhouli Xie; Trevor Nolan; Hao Jiang; Buyun Tang; Mingcai Zhang; Zhaohu Li; Yanhai Yin
Journal:  Plant Cell       Date:  2019-05-24       Impact factor: 11.277

5.  Abscisic Acid Induces Resistance against Bamboo Mosaic Virus through Argonaute2 and 3.

Authors:  Mazen Alazem; Meng-Hsun He; Peter Moffett; Na-Sheng Lin
Journal:  Plant Physiol       Date:  2017-03-07       Impact factor: 8.340

6.  Profiling of Accessible Chromatin Regions across Multiple Plant Species and Cell Types Reveals Common Gene Regulatory Principles and New Control Modules.

Authors:  Kelsey A Maher; Marko Bajic; Kaisa Kajala; Mauricio Reynoso; Germain Pauluzzi; Donnelly A West; Kristina Zumstein; Margaret Woodhouse; Kerry Bubb; Michael W Dorrity; Christine Queitsch; Julia Bailey-Serres; Neelima Sinha; Siobhan M Brady; Roger B Deal
Journal:  Plant Cell       Date:  2017-12-11       Impact factor: 11.277

7.  The BABY BOOM Transcription Factor Activates the LEC1-ABI3-FUS3-LEC2 Network to Induce Somatic Embryogenesis.

Authors:  Anneke Horstman; Mengfan Li; Iris Heidmann; Mieke Weemen; Baojian Chen; Jose M Muino; Gerco C Angenent; Kim Boutilier
Journal:  Plant Physiol       Date:  2017-08-22       Impact factor: 8.340

8.  Transcriptional Profiling Reveals a Time-of-Day-Specific Role of REVEILLE 4/8 in Regulating the First Wave of Heat Shock-Induced Gene Expression in Arabidopsis.

Authors:  Bingjie Li; Zhihua Gao; Xinye Liu; Daye Sun; Wenqiang Tang
Journal:  Plant Cell       Date:  2019-07-29       Impact factor: 11.277

9.  The Arabidopsis Nodulin Homeobox Factor AtNDX Interacts with AtRING1A/B and Negatively Regulates Abscisic Acid Signaling.

Authors:  Yujuan Zhu; Xiaoying Hu; Ying Duan; Shaofang Li; Yu Wang; Amin Ur Rehman; Junna He; Jing Zhang; Deping Hua; Li Yang; Li Wang; Zhizhong Chen; Chuanyou Li; Baoshan Wang; Chun-Peng Song; Qianwen Sun; Shuhua Yang; Zhizhong Gong
Journal:  Plant Cell       Date:  2020-01-09       Impact factor: 11.277

10.  An amiRNA screen uncovers redundant CBF and ERF34/35 transcription factors that differentially regulate arsenite and cadmium responses.

Authors:  Qingqing Xie; Qi Yu; Timothy O Jobe; Allis Pham; Chennan Ge; Qianqian Guo; Jianxiu Liu; Honghong Liu; Huijie Zhang; Yunde Zhao; Shaowu Xue; Felix Hauser; Julian I Schroeder
Journal:  Plant Cell Environ       Date:  2021-02-25       Impact factor: 7.228
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