Literature DB >> 27609050

Identification of inhibitors for single-stranded DNA-binding proteins in eubacteria.

Jason G Glanzer1,2, Jennifer L Endres3, Brendan M Byrne1, Shengqin Liu1, Kenneth W Bayles3, Greg G Oakley4,5.   

Abstract

OBJECTIVES: The increasing threat of drug-resistant bacteria establishes a continuing need for the development of new strategies to fight infection. We examine the inhibition of the essential single-stranded DNA-binding proteins (SSBs) SSBA and SSBB as a potential antimicrobial therapy due to their importance in DNA replication, activating the SOS response and promoting competence-based mechanisms of resistance by incorporating new DNA.
METHODS: Purified recombinant SSBs from Gram-positive (Staphylococcus aureus and Bacillus anthracis) and Gram-negative (Escherichia coli and Francisella tularensis) bacteria were assessed in a high-throughput screen for inhibition of duplex DNA unwinding by small molecule inhibitors. Secondary electrophoretic mobility shift assays further validated the top hits that were then tested for MICs using in vitro assays.
RESULTS: We have identified compounds that show cross-reactivity in vitro, as well as inhibition of both F. tularensis and B. anthracis SSBA. Five compounds were moderately toxic to at least two of the four bacterial strains in vivo, including two compounds that were selectively non-toxic to human cells, 9-hydroxyphenylfluoron and purpurogallin. Three of the SSBA inhibitors also inhibited S. aureus SSBB in Gram-positive bacteria.
CONCLUSIONS: Results from our study support the potential for SSB inhibitors as broad-spectrum antibacterial agents, with dual targeting capabilities against Gram-positive bacteria.
© The Author 2016. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

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Year:  2016        PMID: 27609050      PMCID: PMC5181397          DOI: 10.1093/jac/dkw340

Source DB:  PubMed          Journal:  J Antimicrob Chemother        ISSN: 0305-7453            Impact factor:   5.790


  49 in total

1.  A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays.

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Journal:  J Biomol Screen       Date:  1999

2.  The deoxyribonucleic acid unwinding protein of Escherichia coli. Properties and functions in replication.

Authors:  J H Weiner; L L Bertsch; A Kornberg
Journal:  J Biol Chem       Date:  1975-03-25       Impact factor: 5.157

3.  Gene expression intensity shapes evolutionary rates of the proteins encoded by the vertebrate genome.

Authors:  Sankar Subramanian; Sudhir Kumar
Journal:  Genetics       Date:  2004-09       Impact factor: 4.562

4.  Multiple C-terminal tails within a single E. coli SSB homotetramer coordinate DNA replication and repair.

Authors:  Edwin Antony; Elizabeth Weiland; Quan Yuan; Carol M Manhart; Binh Nguyen; Alexander G Kozlov; Charles S McHenry; Timothy M Lohman
Journal:  J Mol Biol       Date:  2013-09-07       Impact factor: 5.469

5.  Intrinsically disordered C-terminal tails of E. coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA.

Authors:  Alexander G Kozlov; Elizabeth Weiland; Anuradha Mittal; Vince Waldman; Edwin Antony; Nicole Fazio; Rohit V Pappu; Timothy M Lohman
Journal:  J Mol Biol       Date:  2015-01-03       Impact factor: 5.469

6.  Small-molecule inhibitors of bacterial AddAB and RecBCD helicase-nuclease DNA repair enzymes.

Authors:  Susan K Amundsen; Timothy Spicer; Ahmet C Karabulut; Luz Marina Londoño; Christina Eberhart; Virneliz Fernandez Vega; Thomas D Bannister; Peter Hodder; Gerald R Smith
Journal:  ACS Chem Biol       Date:  2012-03-23       Impact factor: 5.100

7.  Characterization and classification of strains of Francisella tularensis isolated in the central Asian focus of the Soviet Union and in Japan.

Authors:  G Sandström; A Sjöstedt; M Forsman; N V Pavlovich; B N Mishankin
Journal:  J Clin Microbiol       Date:  1992-01       Impact factor: 5.948

8.  Ultraviolet phototherapy and photochemotherapy of acne vulgaris.

Authors:  O H Mills; A M Kligman
Journal:  Arch Dermatol       Date:  1978-02

9.  A DNA-unwinding protein isolated from Escherichia coli: its interaction with DNA and with DNA polymerases.

Authors:  N Sigal; H Delius; T Kornberg; M L Gefter; B Alberts
Journal:  Proc Natl Acad Sci U S A       Date:  1972-12       Impact factor: 11.205

10.  Role of SSB protein in RecA promoted branch migration reactions.

Authors:  S C West; E Cassuto; P Howard-Flanders
Journal:  Mol Gen Genet       Date:  1982
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  7 in total

1.  Characterization of single-stranded DNA-binding protein SsbB from Staphylococcus aureus: SsbB cannot stimulate PriA helicase.

Authors:  Kuan-Lin Chen; Jen-Hao Cheng; Chih-Yang Lin; Yen-Hua Huang; Cheng-Yang Huang
Journal:  RSC Adv       Date:  2018-08-07       Impact factor: 4.036

2.  Crystal Structure of an SSB Protein from Salmonella enterica and Its Inhibition by Flavanonol Taxifolin.

Authors:  En-Shyh Lin; Yen-Hua Huang; Ren-Hong Luo; Zarrin Basharat; Cheng-Yang Huang
Journal:  Int J Mol Sci       Date:  2022-04-15       Impact factor: 6.208

3.  Sak and Sak4 recombinases are required for bacteriophage replication in Staphylococcus aureus.

Authors:  Maan M Neamah; Ignacio Mir-Sanchis; María López-Sanz; Sonia Acosta; Ignacio Baquedano; Andreas F Haag; Alberto Marina; Silvia Ayora; José R Penadés
Journal:  Nucleic Acids Res       Date:  2017-06-20       Impact factor: 16.971

Review 4.  Targeting DNA Replication and Repair for the Development of Novel Therapeutics against Tuberculosis.

Authors:  Michael A Reiche; Digby F Warner; Valerie Mizrahi
Journal:  Front Mol Biosci       Date:  2017-11-14

5.  Two-Metal Ion-Dependent Enzymes as Potential Antiviral Targets in Human Herpesviruses.

Authors:  Katherine A DiScipio; Savithri Weerasooriya; Renata Szczepaniak; Akram Hazeen; Lee R Wright; Dennis L Wright; Sandra K Weller
Journal:  mBio       Date:  2022-01-25       Impact factor: 7.786

6.  The glycine-rich flexible region in SSB is crucial for PriA stimulation.

Authors:  Yen-Hua Huang; Cheng-Yang Huang
Journal:  RSC Adv       Date:  2018-10-15       Impact factor: 4.036

7.  SAAV2152 is a single-stranded DNA binding protein: the third SSB in Staphylococcus aureus.

Authors:  Yen-Hua Huang; Cheng-Yang Huang
Journal:  Oncotarget       Date:  2018-02-05
  7 in total

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