| Literature DB >> 27607427 |
Dominik Rath1, Elke Schaeffeler2, Stefan Winter2, Jens Hewer1, Karin Müller1, Michal Droppa1, Fabian Stimpfle1, Meinrad Gawaz1, Matthias Schwab2,3, Tobias Geisler1.
Abstract
BACKGROUND: SDF1 and its cognate receptors CXCR4 and CXCR7 are involved in myocardial repair and are associated with outcome in cardiovascular patients. Hence, we aimed to investigate clinically significant SDF1 SNPs for their prognostic impact in patients with cardiovascular disease. METHODS ANDEntities:
Mesh:
Substances:
Year: 2016 PMID: 27607427 PMCID: PMC5015912 DOI: 10.1371/journal.pone.0161933
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Baseline characteristics of the complete cohort (n = 872) (hc = homozygote carriers).
| Characteristics | All (n = 872) | rs1065297 (n = 870) | p | rs2839693 (n = 870) | p | ||
|---|---|---|---|---|---|---|---|
| (n = 799) hc of major allele | (n = 71) minor allele carriers | (n = 633) hc of major allele | (n = 237) minor allele carriers | ||||
| No. of males | 662 (70%) | 610 (71%) | 52 (68%) | 0.701 | 486 (71%) | 176 (68%) | 0.442 |
| Age (years ± SD) | 68 (±12) | 68 (±12) | 66 (±14) | 0.251 | 68 (±13) | 68 (±12) | 0.346 |
| Arterial hypertension | 760 (81%) | 702 (81%) | 58 (76%) | 0.405 | 551 (81%) | 209 (81%) | 0.756 |
| Hyperlipidemia | 522 (55%) | 478 (55%) | 43 (57%) | 0.635 | 395 (58%) | 126 (49%) | |
| Diabetes mellitus type II | 298 (32%) | 276 (32%) | 22 (29%) | 0.837 | 211 (31%) | 87 (34%) | 0.275 |
| Smoking | 375 (40%) | 345 (40%) | 29 (38%) | 0.835 | 276 (40%) | 98 (38%) | 0.568 |
| Gensini Score | 39 (±42) | 39 (±43) | 36 (±32) | 0.520 | 40 (±43) | 36 (±38) | 0.209 |
| Atrial fibrillation | 195 (21%) | 180 (21%) | 14 (18%) | 0.782 | 137 (20%) | 57 (22%) | 0.364 |
| LVEF% normal | 447 (47%) | 413 (48%) | 33 (43%) | 0.457 | 330 (48%) | 116 (45%) | 0.525 |
| LVEF% mild impairment | 241 (26%) | 224 (26%) | 17 (22%) | 166 (24%) | 75 (29%) | ||
| LVEF% moderate impairment | 155 (17%) | 143 (17%) | 11 (14%) | 113 (17%) | 41 (16%) | ||
| LVEF% severe impairment | 92 (10%) | 81 (9%) | 11 (14%) | 68 (10%) | 24 (9%) | ||
| LVEF% unknown | 8 (1%) | 4 (0%) | 4 (5%) | 7 (1%) | 1 (0%) | ||
| Renal function (creatinine ±SD) | 1.1 (±0.7) | 1.0 (±0.6) | 1.1 (±1.3) | 0.542 | 1.1 (±0.7) | 1.0 (±0.6) | 0.902 |
| Acetyl salicylic acid | 495 (52%) | 451 (52%) | 43 (57%) | 0.433 | 359 (52%) | 135 (53%) | 0.919 |
| Clopidogrel | 108 (11%) | 93 (11%) | 15 (20%) | 80 (12%) | 28 (11%) | 0.717 | |
| Prasugrel | 17 (2%) | 15 (2%) | 2 (3%) | 0.571 | 11 (2%) | 6 (2%) | 0.461 |
| Ticagrelor | 38 (4%) | 34 (4%) | 4 (5%) | 0.568 | 28 (4%) | 10 (4%) | 0.880 |
| Oral anticoagulants | 80 (8%) | 73 (8%) | 6 (8%) | 0.950 | 54 (8%) | 25 (10%) | 0.208 |
| ACE inhibitors | 393 (42%) | 365 (42%) | 28 (37%) | 0.386 | 286 (42%) | 107 (42%) | 0.915 |
| AT1-receptor antagonists | 173 (18%) | 158 (18%) | 15 (20%) | 0.731 | 117 (17%) | 56 (22%) | 0.105 |
| Ca-channel inhibitors | 180 (19%) | 172 (20%) | 8 (11%) | 131 (19%) | 49 (19%) | 0.950 | |
| Beta blockers | 528 (56%) | 485 (56%) | 41 (54%) | 0.764 | 377 (55%) | 149 (58%) | 0.475 |
| Statins | 425 (45%) | 386 (45%) | 38 (50%) | 0.339 | 314 (46%) | 110 (43%) | 0.360 |
| ACS | 350 (40%) | 326 (41%) | 24 (34%) | 0.063 | 258 (41%) | 92 (39%) | 0.879 |
| Stable CAD | 355 (41%) | 314 (39%) | 39 (55%) | 255 (40%) | 98 (41%) | ||
| Other | 167 (19%) | 159 (20%) | 8 (11%) | 120 (19%) | 47 (20%) | ||
| Missing values for SDF1 polymorphisms | 2 (0.2%) | 2 (0.2%) | |||||
Baseline characteristics of the complete cohort (n = 872).
| Characteristics | All (n = 872) | rs266087 (n = 872) | p | rs1801157 (n = 872) | p | ||
|---|---|---|---|---|---|---|---|
| (n = 385) hc of major allele | (n = 487) minor allele carriers | (n = 572) hc of major allele | (n = 300) minor allele carriers | ||||
| No. of males | 662 (70%) | 283 (69%) | 379 (72%) | 0.320 | 425 (69%) | 237 (72%) | 0.426 |
| Age (years ± SD) | 68 (±12) | 69 (±12) | 67 (±13) | 0.053 | 68 (±13) | 67 (±12) | 0.776 |
| Arterial hypertension | 760 (81%) | 340 (82%) | 420 (79%) | 0.407 | 499 (81%) | 261 (79%) | 0.472 |
| Hyperlipidemia | 521 (55%) | 233 (56%) | 289 (55%) | 0.793 | 341 (56%) | 181 (55%) | 0.953 |
| Diabetes mellitus type II | 298 (32%) | 124 (30%) | 174 (33%) | 0.333 | 184 (30%) | 114 (35%) | 0.314 |
| Smoking | 374 (40%) | 163 (39%) | 212 (40%) | 0.723 | 237 (39%) | 138 (42%) | 0.261 |
| Gensini Score | 39 (±42) | 40 (±39) | 43 (±43) | 0.793 | 37 (±38) | 43 (±48) | 0.061 |
| Atrial fibrillation | 194 (21%) | 87 (21%) | 108 (20%) | 0.450 | 121 (20%) | 74 (22%) | 0.561 |
| LVEF% normal | 447 (47%) | 190 (46%) | 257 (48%) | 0.840 | 287 (47%) | 160 (48%) | 0.929 |
| LVEF% mild impairment | 241 (26%) | 111 (27%) | 130 (25%) | 159 (26%) | 82 (25%) | ||
| LVEF% moderate impairment | 155 (17%) | 69 (17%) | 86 (16%) | 101 (16%) | 54 (16%) | ||
| LVEF% severe impairment | 92 (10%) | 40 (10%) | 52 (10%) | 62 (10%) | 30 (9%) | ||
| LVEF% unknown | 8 (1%) | 4 (1%) | 4 (1%) | 4 (1%) | 4(1%) | ||
| Renal function (creatinine ±SD) | 1.1 (±0.7) | 1.1 (±0.7) | 1.0 (±0.6) | 0.471 | 1.1 (±0.8) | 1.0 (±0.4) | |
| Acetyl salicylic acid | 494 (52%) | 206 (50%) | 289 (55%) | 0.103 | 318 (52%) | 177 (54%) | 0.561 |
| Clopidogrel | 108 (11%) | 47 (11%) | 61 (12%) | 0.887 | 67 (11%) | 41 (12%) | 0.484 |
| Prasugrel | 17 (2%) | 6 (1%) | 11 (2%) | 0.458 | 9 (1%) | 8 (2%) | 0.290 |
| Ticagrelor | 38 (4%) | 18 (4%) | 20 (4%) | 0.684 | 29 (5%) | 9 (3%) | 0.137 |
| Oral anticoagulants | 79 (8%) | 37 (9%) | 43 (8%) | 0.508 | 53 (9%) | 27 (8%) | 0.754 |
| ACE inhibitors | 393 (42%) | 173 (42%) | 222 (42%) | 0.908 | 254 (41%) | 141 (43%) | 0.677 |
| AT1-receptor antagonists | 173 (18%) | 64 (15%) | 109 (21%) | 108 (18%) | 65 (20%) | 0.420 | |
| Ca-channel inhibitors | 180 (19%) | 78 (19%) | 102 (19%) | 0.837 | 120 (20%) | 60 (18%) | 0.616 |
| Beta blockers | 526 (56%) | 222 (54%) | 306 (58%) | 0.167 | 341 (56%) | 187 (57%) | 0.726 |
| Statins | 424 (45%) | 177 (43%) | 248 (47%) | 0.183 | 270 (44%) | 155 (47%) | 0.369 |
| ACS | 350 (40%) | 149 (39%) | 201 (41%) | 0.217 | 227 (40%) | 123 (41%) | 0.821 |
| Stable CAD | 355 (41%) | 170 (44%) | 185 (38%) | 237 (41%) | 118 (39%) | ||
| Other | 167 (19%) | 66 (17%) | 101 (21%) | 108 (19%) | 59 (20%) | ||
| Missing values for SDF1 Polymorphisms | 0 (0%) | 0 (0%) | |||||
Events and incident rate (IR)/ 100 person years (PY) in the overall cohort (n = 872) (71 patients lost to follow-up).
| All cause mortality | N = 51 (48/3) | 6.0/4.2 | 0.540 |
| Myocardial infarction | N = 54 (52/2) | 6.5/2.8 | 0.217 |
| Ischemic stroke | N = 13 (12/1) | 1.5/1.4 | 0.965 |
| Combined endpoint | N = 98 (93/5) | 11.6/7.0 | 0.240 |
| All cause mortality | N = 51 (41/10) | 6.5/4.2 | 0.207 |
| Myocardial infarction | N = 54 (45/9) | 7.1/3.8 | 0.072 |
| Ischemic stroke | N = 13 (10/3) | 1.6/1.3 | 0.798 |
| Combined endpoint | N = 98 (80/18) | 12.6/7.6 | |
| All cause mortality | N = 51 (30/21) | 5.2/7.0 | 0.294 |
| Myocardial infarction | N = 54 (35/19) | 6.1/6.3 | 0.901 |
| Ischemic stroke | N = 13 (5/8) | 0.9/2.7 | 0.118 |
| Combined endpoint | N = 98 (61/37) | 10.7/12.3 | 0.459 |
| All cause mortality | N = 51 (23/28) | 6.0/5.7 | 0.888 |
| Myocardial infarction | N = 54 (19/35) | 4.9/7.2 | 0.171 |
| Ischemic stroke | N = 13 (2/11) | 0.5/2.3 | 0.127 |
| Combined endpoint | N = 98 (38/60) | 9.9/12.3 | 0.255 |
Cox Regression analysis for the combined endpoint as dependent variable and clinical factors as covariates in the overall cohort of cardiovascular patients.
| Variable | HR rs2839693 (95% CI) | p | q-value |
|---|---|---|---|
| Hypertension | 0.82 (0.45/1.50) | 0.527 | 0.184 |
| Hyperlipoproteinaemia | 0.78 (0.50/1.22) | 0.278 | 0.166 |
| Smoker | 0.77 (0.47/1.28) | 0.320 | 0.176 |
| Diabetes mellitus type II | 1.18 (0.76/1.84) | 0.459 | 0.184 |
| ASA | 2.08 (1.24/3.49) | ||
| Clopidogrel | 1.07 (0.59/1.96) | 0.820 | 0.212 |
| ACE inhibitors | 0.69 (0.44/1.10) | 0.119 | 0.1 |
| Beta blockers | 1.17 (0.70/1.93) | 0.552 | 0.184 |
| Statins | 0.85 (0.53/1.39) | 0.524 | 0.184 |
| Age | 1.06 (1.03/1.08) | ||
| Gender | 0.98 (0.61/1.57) | 0.975 | 0.224 |
| LVEF% class | 1.52 (1.24/1.87) | ||
| SDF1 SNP | 0.51 (0.30/0.88) |
*numerically coded as 0 (normal), 1 (mild), 2 (moderate), and 3 (severe impairment)
**the SNP rs2839693 is highly correlated with rs266089 (LD = 98, r2 = 94), as described in the Supporting Information.
Fig 1Kaplan-Meier curves showing cumulative survival (combined endpoint all-cause death and/or MI and/or ischemic stroke) stratified according to SDF1 rs2839693 homozygote carriers of major allele and carriers of minor allele.
No. at risk: blue = homozygote carriers of major allele, green = carriers of minor allele.
Fig 2Kaplan-Meier curves showing cumulative survival (combined endpoint all-cause death and/or MI and/or ischemic stroke) stratified according to SDF1 rs266089 homozygote carriers of major allele and carriers of minor allele.
No. at risk: blue = homozygote carriers of major allele, green = carriers of minor allele.
SDF1 haplotypes and their effects on the combined endpoint in uni- and multivariate Cox regression.
| SDF1 variants | Univariate analysis | Multivariate analysis | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Haplotype | 1 | 2 | 3 | 4 | 5 | 6 | Frequency (%) | HR (95% CI) | p (Wald test) | HR (95% CI) | p (Wald test) |
| ReferenceH-01 | 47.3 | - | - | - | - | ||||||
| H-02 | 18.7 | 0.98 (0.62/1.53) | 0.922 | 0.76 (0.46/1.25) | 0.285 | ||||||
| H-03 | 15 | 1.09 (0.71/1.66) | 0.687 | 1.00 (0.63/1.59) | 0.996 | ||||||
| H-04 | 13.8 | 0.59 (0.35/1.00) | 0.052 | 0.47 (0.27/0.84) | |||||||
1 rs1065297, 2 rs1801157, 3 rs266089, 4 rs266087, 5 rs266085, 6 rs2839693
* variants are ordered according to chromosomal position (GRCh38); light grey/dark grey = carriers of major/minor allele
† with covariates as listed in Table 4
‡ listed are only haplotypes with frequencies ≥ 5%
Fig 3Kaplan-Meier curves showing cumulative survival (combined endpoint all-cause death and/or MI and/or ischemic stroke) stratified according to carriers of reference haplotype H-01 and haplotype H-04 (applying a dominant haplotype model).
Wald test p-value refers to our multivariate Cox regression for SDF1 haplotypes (see Table 5). Red = carriers of 1 or 2 copies of H-01, but not H-04, Orange = carriers of 1 or 2 copies of H-04.