| Literature DB >> 27604267 |
Fengjiao Zhang1,2, Lichun Hua1, Jiangsong Fei1, Fan Wang1, Yuan Liao1, Weimin Fang1, Fadi Chen1, Nianjun Teng3,4.
Abstract
Entities:
Year: 2016 PMID: 27604267 PMCID: PMC5013638 DOI: 10.1186/s12864-016-3071-x
Source DB: PubMed Journal: BMC Genomics ISSN: 1471-2164 Impact factor: 3.969
Fig. 3The expression patterns of DEGs in two transcriptome libraries. Blue columns represent the cross C. morifolium × tetraploid C. nankingense, and green columns represent the cross C. morifolium × diploid C. nankingense
Fig. 4Analysis of the tricarboxylic acid (TCA) cycle pathway in normal and abnormal embryos 18 DAP in the cross C. morifolium × tetraploid C. nankingense. The map displays selected steps from the KEGG pathway ko00020 ‘Citrate cycle (TCA cycle)’. Yellow indicates higher relative levels and blue indicates lower levels in AE18. Enzymes are given as EC numbers: 1.2.4.1, pyruvate dehydrogenase; 1.8.1.4, dihydrolipoamide dehydrogenase; 2.3.1.12, dihydrolipoamide acetyltransferase; 2.3.3.1, citrate synthase; 1.3.5.1, succinate dehydrogenase; and 1.1.1.37, malate dehydrogenase
Fig. 5Analysis of the pathway related to auxin signal transduction in normal and abnormal embryos 18 DAP in the cross C. morifolium × tetraploid C. nankingense. The map displays selected steps from the KEGG pathway ko04075 ‘Plant hormone signal transduction’. Blue indicates the lower expression level of genes in AE18
Fig. 6Validation of the RNA-Seq results by qRT-PCR. FPKM represents the gene abundance in the sequencing data of the transcriptome libraries