Literature DB >> 27601636

Exploring the zone of anisotropy and broken symmetries in DNA-mediated nanoparticle crystallization.

Matthew N O'Brien1, Martin Girard2, Hai-Xin Lin1, Jaime A Millan3, Monica Olvera de la Cruz3, Byeongdu Lee4, Chad A Mirkin5.   

Abstract

In this work, we present a joint experimental and molecular dynamics simulations effort to understand and map the crystallization behavior of polyhedral nanoparticles assembled via the interaction of DNA surface ligands. In these systems, we systematically investigated the interplay between the effects of particle core (via the particle symmetry and particle size) and ligands (via the ligand length) on crystallization behavior. This investigation revealed rich phase diagrams, previously unobserved phase transitions in polyhedral crystallization behavior, and an unexpected symmetry breaking in the ligand distribution on a particle surface. To understand these results, we introduce the concept of a zone of anisotropy, or the portion of the phase space where the anisotropy of the particle is preserved in the crystallization behavior. Through comparison of the zone of anisotropy for each particle we develop a foundational roadmap to guide future investigations.

Keywords:  DNA; anisotropic nanoparticles; broken symmetry; colloidal crystallization; nanomaterials

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Year:  2016        PMID: 27601636      PMCID: PMC5035876          DOI: 10.1073/pnas.1611808113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

1.  Modeling the crystallization of spherical nucleic acid nanoparticle conjugates with molecular dynamics simulations.

Authors:  Ting I N G Li; Rastko Sknepnek; Robert J Macfarlane; Chad A Mirkin; Monica Olvera de la Cruz
Journal:  Nano Lett       Date:  2012-04-06       Impact factor: 11.189

2.  Nanoparticle superlattice engineering with DNA.

Authors:  Robert J Macfarlane; Byeongdu Lee; Matthew R Jones; Nadine Harris; George C Schatz; Chad A Mirkin
Journal:  Science       Date:  2011-10-14       Impact factor: 47.728

3.  DNA-guided crystallization of colloidal nanoparticles.

Authors:  Dmytro Nykypanchuk; Mathew M Maye; Daniel van der Lelie; Oleg Gang
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

4.  Phase diagram and structural diversity of a family of truncated cubes: degenerate close-packed structures and vacancy-rich states.

Authors:  Anjan P Gantapara; Joost de Graaf; René van Roij; Marjolein Dijkstra
Journal:  Phys Rev Lett       Date:  2013-07-01       Impact factor: 9.161

5.  Diamond family of nanoparticle superlattices.

Authors:  Wenyan Liu; Miho Tagawa; Huolin L Xin; Tong Wang; Hamed Emamy; Huilin Li; Kevin G Yager; Francis W Starr; Alexei V Tkachenko; Oleg Gang
Journal:  Science       Date:  2016-02-05       Impact factor: 47.728

6.  The role of interparticle and external forces in nanoparticle assembly.

Authors:  Younjin Min; Mustafa Akbulut; Kai Kristiansen; Yuval Golan; Jacob Israelachvili
Journal:  Nat Mater       Date:  2008-07       Impact factor: 43.841

Review 7.  Nanoscale forces and their uses in self-assembly.

Authors:  Kyle J M Bishop; Christopher E Wilmer; Siowling Soh; Bartosz A Grzybowski
Journal:  Small       Date:  2009-07       Impact factor: 13.281

Review 8.  Nanomaterials. Programmable materials and the nature of the DNA bond.

Authors:  Matthew R Jones; Nadrian C Seeman; Chad A Mirkin
Journal:  Science       Date:  2015-02-20       Impact factor: 47.728

9.  Transmutable nanoparticles with reconfigurable surface ligands.

Authors:  Youngeun Kim; Robert J Macfarlane; Matthew R Jones; Chad A Mirkin
Journal:  Science       Date:  2016-02-05       Impact factor: 47.728

10.  Modular and Chemically Responsive Oligonucleotide "Bonds" in Nanoparticle Superlattices.

Authors:  Stacey N Barnaby; Ryan V Thaner; Michael B Ross; Keith A Brown; George C Schatz; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2015-10-14       Impact factor: 15.419

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  7 in total

1.  Particle analogs of electrons in colloidal crystals.

Authors:  Martin Girard; Shunzhi Wang; Jingshan S Du; Anindita Das; Ziyin Huang; Vinayak P Dravid; Byeongdu Lee; Chad A Mirkin; Monica Olvera de la Cruz
Journal:  Science       Date:  2019-06-21       Impact factor: 47.728

2.  Colloidal interactions get patchy and directional.

Authors:  Rachael N Kress; Matthew R Jones
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-29       Impact factor: 11.205

3.  Colloidal crystal engineering with metal-organic framework nanoparticles and DNA.

Authors:  Shunzhi Wang; Sarah S Park; Cassandra T Buru; Haixin Lin; Peng-Cheng Chen; Eric W Roth; Omar K Farha; Chad A Mirkin
Journal:  Nat Commun       Date:  2020-05-19       Impact factor: 14.919

Review 4.  Entropic Effects in Polymer Nanocomposites.

Authors:  Xiaobin Dai; Cuiling Hou; Ziyang Xu; Ye Yang; Guolong Zhu; Pengyu Chen; Zihan Huang; Li-Tang Yan
Journal:  Entropy (Basel)       Date:  2019-02-15       Impact factor: 2.524

Review 5.  Mechanistic Investigations of Growth of Anisotropic Nanostructures in Reverse Micelles.

Authors:  Anirban Das; Nitin Yadav; Saikumar Manchala; Manisha Bungla; Ashok K Ganguli
Journal:  ACS Omega       Date:  2021-01-04

Review 6.  Self-Assembly of DNA-Grafted Colloids: A Review of Challenges.

Authors:  Manish Dwivedi; Swarn Lata Singh; Atul S Bharadwaj; Vimal Kishore; Ajay Vikram Singh
Journal:  Micromachines (Basel)       Date:  2022-07-14       Impact factor: 3.523

7.  Monte Carlo simulation of cylinders with short-range attractions.

Authors:  Harold W Hatch; Nathan A Mahynski; Ryan P Murphy; Marco A Blanco; Vincent K Shen
Journal:  AIP Adv       Date:  2018-09-12       Impact factor: 1.548

  7 in total

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