Literature DB >> 27601130

Holo Structure and Steady State Kinetics of the Thiazolinyl Imine Reductases for Siderophore Biosynthesis.

Kathleen M Meneely1, Trey A Ronnebaum1, Andrew P Riley1, Thomas E Prisinzano1, Audrey L Lamb1.   

Abstract

Thiazolinyl imine reductases catalyze the NADPH-dependent reduction of a thiazoline to a thiazolidine, a required step in the formation of the siderophores yersiniabactin (Yersinia spp.) and pyochelin (Pseudomonas aeruginosa). These stand-alone nonribosomal peptide tailoring domains are structural homologues of sugar oxidoreductases. Two closed structures of the thiazolinyl imine reductase from Yersinia enterocolitica (Irp3) are presented here: an NADP(+)-bound structure to 1.45 Å resolution and a holo structure to 1.28 Å resolution with NADP(+) and a substrate analogue bound. Michaelis-Menten kinetics were measured using the same substrate analogue and the homologue from P. aeruginosa, PchG. The data presented here support the hypothesis that tyrosine 128 is the likely general acid residue for catalysis and also highlight the phosphopantetheine tunnel for tethering of the substrate to the nonribosomal peptide synthetase module during assembly line biosynthesis of the siderophore.

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Year:  2016        PMID: 27601130      PMCID: PMC5046821          DOI: 10.1021/acs.biochem.6b00735

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  37 in total

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Authors:  Zeb A Youard; Nicolas Wenner; Cornelia Reimmann
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Review 2.  Structural and functional features of dimeric dihydrodiol dehydrogenase.

Authors:  V Carbone; A Hara; O El-Kabbani
Journal:  Cell Mol Life Sci       Date:  2008-05       Impact factor: 9.261

3.  The structure of glucose-fructose oxidoreductase from Zymomonas mobilis: an osmoprotective periplasmic enzyme containing non-dissociable NADP.

Authors:  R L Kingston; R K Scopes; E N Baker
Journal:  Structure       Date:  1996-12-15       Impact factor: 5.006

4.  Genetic organization of the yersiniabactin biosynthetic region and construction of avirulent mutants in Yersinia pestis.

Authors:  S W Bearden; J D Fetherston; R D Perry
Journal:  Infect Immun       Date:  1997-05       Impact factor: 3.441

5.  Integration, scaling, space-group assignment and post-refinement.

Authors:  Wolfgang Kabsch
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-01-22

6.  Iron uptake with ferripyochelin and ferric citrate by Pseudomonas aeruginosa.

Authors:  C D Cox
Journal:  J Bacteriol       Date:  1980-05       Impact factor: 3.490

7.  Structure and activity of NADPH-dependent reductase Q1EQE0 from Streptomyces kanamyceticus, which catalyses the R-selective reduction of an imine substrate.

Authors:  María Rodríguez-Mata; Annika Frank; Elizabeth Wells; Friedemann Leipold; Nicholas J Turner; Sam Hart; Johan P Turkenburg; Gideon Grogan
Journal:  Chembiochem       Date:  2013-06-28       Impact factor: 3.164

8.  Kinetics and equilibria of the reductive and oxidative half-reactions of human renalase with α-NADPH.

Authors:  Brett A Beaupre; Matthew R Hoag; Brenton R Carmichael; Graham R Moran
Journal:  Biochemistry       Date:  2013-11-27       Impact factor: 3.162

9.  Pseudomonas fluorescens CHA0 produces enantio-pyochelin, the optical antipode of the Pseudomonas aeruginosa siderophore pyochelin.

Authors:  Zeb A Youard; Gaëtan L A Mislin; Paul A Majcherczyk; Isabelle J Schalk; Cornelia Reimmann
Journal:  J Biol Chem       Date:  2007-10-15       Impact factor: 5.157

10.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21
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  5 in total

1.  Stuffed Methyltransferase Catalyzes the Penultimate Step of Pyochelin Biosynthesis.

Authors:  Trey A Ronnebaum; Jeffrey S McFarlane; Thomas E Prisinzano; Squire J Booker; Audrey L Lamb
Journal:  Biochemistry       Date:  2018-12-27       Impact factor: 3.162

Review 2.  Nonribosomal peptide synthetase biosynthetic clusters of ESKAPE pathogens.

Authors:  Andrew M Gulick
Journal:  Nat Prod Rep       Date:  2017-08-02       Impact factor: 13.423

Review 3.  Nonribosomal peptides for iron acquisition: pyochelin biosynthesis as a case study.

Authors:  Trey A Ronnebaum; Audrey L Lamb
Journal:  Curr Opin Struct Biol       Date:  2018-02-20       Impact factor: 6.809

4.  Enantioselective reduction of sulfur-containing cyclic imines through biocatalysis.

Authors:  Nadine Zumbrägel; Christian Merten; Stefan M Huber; Harald Gröger
Journal:  Nat Commun       Date:  2018-05-16       Impact factor: 14.919

5.  Structural Characterization of an S-enantioselective Imine Reductase from Mycobacterium Smegmatis.

Authors:  Timo Meyer; Nadine Zumbrägel; Christina Geerds; Harald Gröger; Hartmut H Niemann
Journal:  Biomolecules       Date:  2020-07-31
  5 in total

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