Literature DB >> 27600679

Silencing transposable elements in the Drosophila germline.

Fu Yang1,2, Rongwen Xi3.   

Abstract

Transposable elements or transposons are DNA pieces that can move around within the genome and are, therefore, potential threat to genome stability and faithful transmission of the genetic information in the germline. Accordingly, self-defense mechanisms have evolved in the metazoan germline to silence transposons, and the primary mechanism requires the germline-specific non-coding small RNAs, named Piwi-interacting RNA (piRNAs), which are in complex with Argonaute family of PIWI proteins (the piRNA-RISC complexes), to silence transposons. piRNA-mediated transposon silencing occurs at both transcriptional and post-transcriptional levels. With the advantages of genetic manipulation and advances of sequencing technology, much progress has been made on the molecular mechanisms of piRNA-mediated transposon silencing in Drosophila melanogaster, which will be the focus of this review. Because piRNA-mediated transposon silencing is evolutionarily conserved in metazoan, model organisms, such as Drosophila, will continue to be served as pioneer systems towards the complete understanding of transposon silencing in the metazoan germline.

Entities:  

Keywords:  Drosophila; Piwi; Transposon silencing; piRNA

Mesh:

Substances:

Year:  2016        PMID: 27600679     DOI: 10.1007/s00018-016-2353-4

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  121 in total

1.  Separation of stem cell maintenance and transposon silencing functions of Piwi protein.

Authors:  Mikhail S Klenov; Olesya A Sokolova; Evgeny Y Yakushev; Anastasia D Stolyarenko; Elena A Mikhaleva; Sergey A Lavrov; Vladimir A Gvozdev
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  N6-methyladenine DNA modification in Drosophila.

Authors:  Guoqiang Zhang; Hua Huang; Di Liu; Ying Cheng; Xiaoling Liu; Wenxin Zhang; Ruichuan Yin; Dapeng Zhang; Peng Zhang; Jianzhao Liu; Chaoyi Li; Baodong Liu; Yuewan Luo; Yuanxiang Zhu; Ning Zhang; Shunmin He; Chuan He; Hailin Wang; Dahua Chen
Journal:  Cell       Date:  2015-04-30       Impact factor: 41.582

3.  Yb integrates piRNA intermediates and processing factors into perinuclear bodies to enhance piRISC assembly.

Authors:  Yukiko Murota; Hirotsugu Ishizu; Shinichi Nakagawa; Yuka W Iwasaki; Shinsuke Shibata; Miharu K Kamatani; Kuniaki Saito; Hideyuki Okano; Haruhiko Siomi; Mikiko C Siomi
Journal:  Cell Rep       Date:  2014-06-19       Impact factor: 9.423

4.  Drosophila PIWI associates with chromatin and interacts directly with HP1a.

Authors:  Brent Brower-Toland; Seth D Findley; Ling Jiang; Li Liu; Hang Yin; Monica Dus; Pei Zhou; Sarah C R Elgin; Haifan Lin
Journal:  Genes Dev       Date:  2007-09-15       Impact factor: 11.361

5.  DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes.

Authors:  Satomi Kuramochi-Miyagawa; Toshiaki Watanabe; Kengo Gotoh; Yasushi Totoki; Atsushi Toyoda; Masahito Ikawa; Noriko Asada; Kanako Kojima; Yuka Yamaguchi; Takashi W Ijiri; Kenichiro Hata; En Li; Yoichi Matsuda; Tohru Kimura; Masaru Okabe; Yoshiyuki Sakaki; Hiroyuki Sasaki; Toru Nakano
Journal:  Genes Dev       Date:  2008-04-01       Impact factor: 11.361

6.  Multiple roles for Piwi in silencing Drosophila transposons.

Authors:  Nikolay V Rozhkov; Molly Hammell; Gregory J Hannon
Journal:  Genes Dev       Date:  2013-02-07       Impact factor: 11.361

7.  An endogenous small interfering RNA pathway in Drosophila.

Authors:  Benjamin Czech; Colin D Malone; Rui Zhou; Alexander Stark; Catherine Schlingeheyde; Monica Dus; Norbert Perrimon; Manolis Kellis; James A Wohlschlegel; Ravi Sachidanandam; Gregory J Hannon; Julius Brennecke
Journal:  Nature       Date:  2008-05-07       Impact factor: 49.962

8.  Vreteno, a gonad-specific protein, is essential for germline development and primary piRNA biogenesis in Drosophila.

Authors:  Andrea L Zamparini; Marie Y Davis; Colin D Malone; Eric Vieira; Jiri Zavadil; Ravi Sachidanandam; Gregory J Hannon; Ruth Lehmann
Journal:  Development       Date:  2011-08-10       Impact factor: 6.868

9.  Structure of yeast Argonaute with guide RNA.

Authors:  Kotaro Nakanishi; David E Weinberg; David P Bartel; Dinshaw J Patel
Journal:  Nature       Date:  2012-06-20       Impact factor: 49.962

10.  Antagonistic roles of Nibbler and Hen1 in modulating piRNA 3' ends in Drosophila.

Authors:  Hui Wang; Zaijun Ma; Kongyan Niu; Yi Xiao; Xiaofen Wu; Chenyu Pan; Yun Zhao; Kai Wang; Yaoyang Zhang; Nan Liu
Journal:  Development       Date:  2015-12-30       Impact factor: 6.868

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  6 in total

1.  Longevity and transposon defense, the case of termite reproductives.

Authors:  Daniel Elsner; Karen Meusemann; Judith Korb
Journal:  Proc Natl Acad Sci U S A       Date:  2018-05-07       Impact factor: 11.205

Review 2.  Fidelity in RNA-based recognition of transposable elements.

Authors:  Ilaria Ugolini; Mario Halic
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-05       Impact factor: 6.237

Review 3.  Epigenetic regulation of drosophila germline stem cell maintenance and differentiation.

Authors:  Velinda Vidaurre; Xin Chen
Journal:  Dev Biol       Date:  2021-02-18       Impact factor: 3.582

4.  Drosophila exoribonuclease nibbler is a tumor suppressor, acts within the RNAi machinery and is not enriched in the nuage during early oogenesis.

Authors:  Casimiro Castillejo-López; Xiaoli Cai; Khalid Fahmy; Stefan Baumgartner
Journal:  Hereditas       Date:  2017-09-29       Impact factor: 3.271

5.  Rapid Expansion of a Highly Germline-Expressed Mariner Element Acquired by Horizontal Transfer in the Fire Ant Genome.

Authors:  Chih-Chi Lee; John Wang
Journal:  Genome Biol Evol       Date:  2018-12-01       Impact factor: 3.416

6.  Ovaries absent links dLsd1 to HP1a for local H3K4 demethylation required for heterochromatic gene silencing.

Authors:  Fu Yang; Zhenghui Quan; Huanwei Huang; Minghui He; Xicheng Liu; Tao Cai; Rongwen Xi
Journal:  Elife       Date:  2019-01-16       Impact factor: 8.140

  6 in total

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