Literature DB >> 27593164

Species delimitation in the reef coral genera Echinophyllia and Oxypora (Scleractinia, Lobophylliidae) with a description of two new species.

Roberto Arrigoni1, Michael L Berumen2, Chaolun Allen Chen3, Tullia I Terraneo2, Andrew H Baird4, Claude Payri5, Francesca Benzoni6.   

Abstract

Scleractinian corals are affected by environment-induced phenotypic plasticity and intraspecific morphological variation caused by genotype. In an effort to identify new strategies for resolving this taxonomic issue, we applied a molecular approach for species evaluation to two closely related genera, Echinophyllia and Oxypora, for which few molecular data are available. A robust multi-locus phylogeny using DNA sequence data across four loci of both mitochondrial (COI, ATP6-NAD4) and nuclear (histone H3, ITS region) origin from 109 coral colonies was coupled with three independent putative species delimitation methods based on barcoding threshold (ABGD) and coalescence theory (PTP, GMYC). Observed overall congruence across multiple genetic analyses distinguished two traditional species (E. echinoporoides and O. convoluta), a species complex composed of E. aspera, E. orpheensis, E. tarae, and O. glabra, whereas O. lacera and E. echinata were indistinguishable with the sequenced loci. The combination of molecular species delimitation approaches and skeletal character observations allowed the description of two new reef coral species, E. bulbosa sp. n. from the Red Sea and E. gallii sp. n. from the Maldives and Mayotte. This work demonstrated the efficiency of multi-locus phylogenetic analyses and recently developed molecular species delimitation approaches as valuable tools to disentangle taxonomic issues caused by morphological ambiguities and to re-assess the diversity of scleractinian corals.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ABGD; GMYC; Maldives; Mayotte; PTP; Red Sea

Mesh:

Year:  2016        PMID: 27593164     DOI: 10.1016/j.ympev.2016.08.023

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN: 1055-7903            Impact factor:   4.286


  8 in total

1.  Molecular phylogeny of some coral species from the Persian Gulf.

Authors:  Parisa Alidoost Salimi; Pargol Ghavam Mostafavi; Chaolun Allen Chen; Michel Pichon; Mahsa Alidoost Salimi
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2.  Comparison of Methods for Molecular Species Delimitation Across a Range of Speciation Scenarios.

Authors:  Arong Luo; Cheng Ling; Simon Y W Ho; Chao-Dong Zhu
Journal:  Syst Biol       Date:  2018-09-01       Impact factor: 15.683

3.  Resurrecting a subgenus to genus: molecular phylogeny of Euphyllia and Fimbriaphyllia (order Scleractinia; family Euphyllidae; clade V).

Authors:  Katrina S Luzon; Mei-Fang Lin; Chaolun Allen Chen; Ma Carmen A Ablan Lagman; Wilfredo Roehl Y Licuanan
Journal:  PeerJ       Date:  2017-12-04       Impact factor: 2.984

4.  Complete mitochondrial genome of Echinophylliaaspera (Scleractinia, Lobophylliidae): Mitogenome characterization and phylogenetic positioning.

Authors:  Wentao Niu; Shuangen Yu; Peng Tian; Jiaguang Xiao
Journal:  Zookeys       Date:  2018-10-29       Impact factor: 1.546

5.  Singleton molecular species delimitation based on COI-5P barcode sequences revealed high cryptic/undescribed diversity for Chinese katydids (Orthoptera: Tettigoniidae).

Authors:  Zhijun Zhou; Huifang Guo; Li Han; Jinyan Chai; Xuting Che; Fuming Shi
Journal:  BMC Evol Biol       Date:  2019-03-14       Impact factor: 3.260

Review 6.  Standardized terminology and visual atlas of the external morphology and terminalia for the genus Scaptomyza (Diptera: Drosophilidae).

Authors:  Augusto Santos Rampasso; Patrick Michael O'Grady
Journal:  Fly (Austin)       Date:  2022-12       Impact factor: 2.160

7.  Cyphastrea salae, a new species of hard coral from Lord Howe Island, Australia (Scleractinia, Merulinidae).

Authors:  Andrew H Baird; Mia O Hoogenboom; Danwei Huang
Journal:  Zookeys       Date:  2017-03-21       Impact factor: 1.546

8.  Complete Genome Sequence, Molecular Characterization and Phylogenetic Relationships of a Novel Tern Atadenovirus.

Authors:  Alina Matsvay; Marina Dyachkova; Ivan Mikhaylov; Daniil Kiselev; Anna Say; Valentina Burskaia; Ilya Artyushin; Kamil Khafizov; German Shipulin
Journal:  Microorganisms       Date:  2021-12-24
  8 in total

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