Literature DB >> 27590539

DNA purification using dynamic solid-phase extraction on a rotationally-driven polyethylene-terephthalate microdevice.

K R Jackson1, J C Borba2, M Meija3, D L Mills4, D M Haverstick5, K E Olson6, R Aranda6, G T Garner3, E Carrilho2, J P Landers7.   

Abstract

We report the development of a disposable polyester toner centrifugal device for semi-automated, dynamic solid phase DNA extraction (dSPE) from whole blood samples. The integration of a novel adhesive and hydrophobic valving with a simple and low cost microfabrication method allowed for sequential addition of reagents without the need for external equipment for fluid flow control. The spin-dSPE method yielded an average extraction efficiency of ∼45% from 0.6 μL of whole blood. The device performed single sample extractions or accommodate up to four samples for simultaneous DNA extraction, with PCR-readiness DNA confirmed by effective amplification of a β-globin gene. The purity of the DNA was challenged by a multiplex amplification with 16 targeted amplification sites. Successful multiplexed amplification could routinely be obtained using the purified DNA collected post an on-chip extraction, with the results comparable to those obtained with commercial DNA extraction methods. This proof-of-principle work represents a significant step towards a fully-automated low cost DNA extraction device.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  DNA purification; PeT device; Polyethylene terephthalate; dSPE

Mesh:

Substances:

Year:  2016        PMID: 27590539     DOI: 10.1016/j.aca.2016.06.036

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  7 in total

1.  Multiplexed efficient on-chip sample preparation and sensitive amplification-free detection of Ebola virus.

Authors:  K Du; H Cai; M Park; T A Wall; M A Stott; K J Alfson; A Griffiths; R Carrion; J L Patterson; A R Hawkins; H Schmidt; R A Mathies
Journal:  Biosens Bioelectron       Date:  2017-01-03       Impact factor: 10.618

2.  Microfluidic System for Detection of Viral RNA in Blood Using a Barcode Fluorescence Reporter and a Photocleavable Capture Probe.

Authors:  Ke Du; Myeongkee Park; Anthony Griffiths; Ricardo Carrion; Jean Patterson; Holger Schmidt; Richard Mathies
Journal:  Anal Chem       Date:  2017-11-07       Impact factor: 6.986

Review 3.  Recent advances in thread-based microfluidics for diagnostic applications.

Authors:  Xuan Weng; Yuejun Kang; Qian Guo; Bei Peng; Hai Jiang
Journal:  Biosens Bioelectron       Date:  2019-03-08       Impact factor: 10.618

4.  Closable Valves and Channels for Polymeric Microfluidic Devices.

Authors:  Charles P Clark; M Shane Woolf; Sarah L Karstens; Hannah M Lewis; Aeren Q Nauman; James P Landers
Journal:  Micromachines (Basel)       Date:  2020-06-27       Impact factor: 2.891

5.  Versatile and Easily Designable Polyester-Laser Toner Interfaces for Site-Oriented Adsorption of Antibodies.

Authors:  Marcin Drozd; Polina Ivanova; Katarzyna Tokarska; Kamil Żukowski; Aleksandra Kramarska; Adam Nowiński; Ewa Kobylska; Mariusz Pietrzak; Zbigniew Brzózka; Elżbieta Malinowska
Journal:  Int J Mol Sci       Date:  2022-03-29       Impact factor: 5.923

Review 6.  Engineering a sustainable future for point-of-care diagnostics and single-use microfluidic devices.

Authors:  Alfredo Edoardo Ongaro; Zibusiso Ndlovu; Elodie Sollier; Collins Otieno; Pascale Ondoa; Alice Street; Maïwenn Kersaudy-Kerhoas
Journal:  Lab Chip       Date:  2022-08-23       Impact factor: 7.517

7.  Rapid, inexpensive fabrication of electrophoretic microdevices for fluorescence detection.

Authors:  Daniel A Nelson; Brandon L Thompson; An-Chi Scott; Renna Nouwairi; Christopher Birch; Jacquelyn A DuVall; Delphine Le Roux; Jingyi Li; Brian E Root; James P Landers
Journal:  Electrophoresis       Date:  2022-07-08       Impact factor: 3.595

  7 in total

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