Literature DB >> 27589677

Na+-Induced Conformational Change of Pb2+-Stabilized G-Quadruplex and Its Influence on Pb2+ Detection.

Ze Yu1, Wei Zhou1, Juan Han1, Yunchao Li1, Louzhen Fan1, Xiaohong Li1.   

Abstract

Here, we first find that Na+ can induce Pb2+-stabilized T30695 undergoing conformational transition from partly parallel to completely parallel, and further forming a dimeric G-quadruplex, which was characterized by circular dichroism (CD) spectroscopy, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS), and native polyacrylamide gel electrophoresis (PAGE). Thermal denaturation experiments show that the transforming process is a thermodynamics-driven process. Furthermore, the presence of Na+ further improves the binding efficiency of Pb2+-stabilized T30695 with the fluorescent probe (such as ZnPPIX). Based on the fact, with a partially hybridized double-stranded DNA (ds-DNA) containing T30695 as a sensing probe and ZnPPIX as a fluorescence probe, the effect of Na+ on Pb2+ detection is subsequently investigated. The presence of Na+ (varied from 0.3 mM to 500 mM) simultaneously increases the read-out and background fluorescence, which results in a decreased signal-to-noise ratio and further leads to a decreased sensing performance (detection limits is increased to 120 nM). In order to avoid Na+ interference, a fully matched ds-DNA containing T30695 is utilized as a sensing probe to fix the background fluorescence, regardless of whether Na+ is present or not. Thus, a relatively lower detection limit (10 nM) in all Na+-containing real samples is achieved, respectively. Therefore, the paper provides a novel insight into the conformational changes in G-quadruplex and presents an efficient step to resolve the challenging problem about Pb2+ detection in Na+-containing real samples.

Entities:  

Year:  2016        PMID: 27589677     DOI: 10.1021/acs.analchem.6b02466

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  5 in total

1.  A novel electrochemiluminescence biosensor based on the self-ECL emission of conjugated polymer dots for lead ion detection.

Authors:  Ying He; Xiaoxia Hu; Zhengjun Gong; Shihong Chen; Ruo Yuan
Journal:  Mikrochim Acta       Date:  2020-03-18       Impact factor: 5.833

Review 2.  The Red Color of Life Transformed - Synthetic Advances and Emerging Applications of Protoporphyrin IX in Chemical Biology.

Authors:  Elisabeth Sitte; Mathias O Senge
Journal:  European J Org Chem       Date:  2020-03-30

3.  A Label-Free Aptasensor for Ochratoxin a Detection Based on the Structure Switch of Aptamer.

Authors:  Feng Liu; Ailing Ding; Jiushang Zheng; Jiucun Chen; Bin Wang
Journal:  Sensors (Basel)       Date:  2018-06-01       Impact factor: 3.576

4.  A dual-model SERS and RRS analytical platform for Pb(II) based on Ag-doped carbon dot catalytic amplification and aptamer regulation.

Authors:  Haidong Wang; Xiaowei Huang; Guiqing Wen; Zhiliang Jiang
Journal:  Sci Rep       Date:  2019-07-10       Impact factor: 4.379

5.  Interaction between G-Quadruplex and Zinc Cationic Porphyrin: The Role of the Axial Water.

Authors:  Xiangzi Yao; Di Song; Tingxiao Qin; Chunfan Yang; Ze Yu; Xiaohong Li; Kunhui Liu; Hongmei Su
Journal:  Sci Rep       Date:  2017-09-08       Impact factor: 4.379

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.