Literature DB >> 27586139

Genetics and Genomics of Coronary Artery Disease.

Milos Pjanic1, Clint L Miller1, Robert Wirka1, Juyong B Kim1, Daniel M DiRenzo1, Thomas Quertermous2.   

Abstract

Coronary artery disease (or coronary heart disease), is the leading cause of mortality in many of the developing as well as the developed countries of the world. Cholesterol-enriched plaques in the heart's blood vessels combined with inflammation lead to the lesion expansion, narrowing of blood vessels, reduced blood flow, and may subsequently cause lesion rupture and a heart attack. Even though several environmental risk factors have been established, such as high LDL-cholesterol, diabetes, and high blood pressure, the underlying genetic composition may substantially modify the disease risk; hence, genome composition and gene-environment interactions may be critical for disease progression. Ongoing scientific efforts have seen substantial advancements related to the fields of genetics and genomics, with the major breakthroughs yet to come. As genomics is the most rapidly advancing field in the life sciences, it is important to present a comprehensive overview of current efforts. Here, we present a summary of various genetic and genomics assays and approaches applied to coronary artery disease research.

Entities:  

Keywords:  Coronary artery disease; Epigenetics; GWAS; Genetics; Genomics; Transcriptomics

Mesh:

Year:  2016        PMID: 27586139      PMCID: PMC5872834          DOI: 10.1007/s11886-016-0777-y

Source DB:  PubMed          Journal:  Curr Cardiol Rep        ISSN: 1523-3782            Impact factor:   2.931


  110 in total

Review 1.  Determinants and dynamics of genome accessibility.

Authors:  Oliver Bell; Vijay K Tiwari; Nicolas H Thomä; Dirk Schübeler
Journal:  Nat Rev Genet       Date:  2011-07-12       Impact factor: 53.242

2.  Impact of body mass index on coronary heart disease risk factors in men and women. The Framingham Offspring Study.

Authors:  S Lamon-Fava; P W Wilson; E J Schaefer
Journal:  Arterioscler Thromb Vasc Biol       Date:  1996-12       Impact factor: 8.311

3.  Efficient inducible Cre-mediated recombination in Tcf21 cell lineages in the heart and kidney.

Authors:  Asha Acharya; Seung Tae Baek; Serena Banfi; Banu Eskiocak; Michelle D Tallquist
Journal:  Genesis       Date:  2011-08-18       Impact factor: 2.487

Review 4.  RNA-Seq: a revolutionary tool for transcriptomics.

Authors:  Zhong Wang; Mark Gerstein; Michael Snyder
Journal:  Nat Rev Genet       Date:  2009-01       Impact factor: 53.242

5.  Permanent alteration of PCSK9 with in vivo CRISPR-Cas9 genome editing.

Authors:  Qiurong Ding; Alanna Strong; Kevin M Patel; Sze-Ling Ng; Bridget S Gosis; Stephanie N Regan; Chad A Cowan; Daniel J Rader; Kiran Musunuru
Journal:  Circ Res       Date:  2014-06-10       Impact factor: 17.367

Review 6.  Genetic mechanisms mediating atherosclerosis susceptibility at the chromosome 9p21 locus.

Authors:  Michael S Cunnington; Bernard Keavney
Journal:  Curr Atheroscler Rep       Date:  2011-06       Impact factor: 5.113

7.  Coronary Artery Disease Associated Transcription Factor TCF21 Regulates Smooth Muscle Precursor Cells That Contribute to the Fibrous Cap.

Authors:  Sylvia T Nurnberg; Karen Cheng; Azad Raiesdana; Ramendra Kundu; Clint L Miller; Juyong B Kim; Komal Arora; Ivan Carcamo-Oribe; Yiqin Xiong; Nikhil Tellakula; Vivek Nanda; Nikitha Murthy; William A Boisvert; Ulf Hedin; Ljubica Perisic; Silvia Aldi; Lars Maegdefessel; Milos Pjanic; Gary K Owens; Michelle D Tallquist; Thomas Quertermous
Journal:  PLoS Genet       Date:  2015-05-28       Impact factor: 5.917

8.  Characterization of TCF21 Downstream Target Regions Identifies a Transcriptional Network Linking Multiple Independent Coronary Artery Disease Loci.

Authors:  Olga Sazonova; Yuqi Zhao; Sylvia Nürnberg; Clint Miller; Milos Pjanic; Victor G Castano; Juyong B Kim; Elias L Salfati; Anshul B Kundaje; Gill Bejerano; Themistocles Assimes; Xia Yang; Thomas Quertermous
Journal:  PLoS Genet       Date:  2015-05-28       Impact factor: 5.917

9.  Disease-related growth factor and embryonic signaling pathways modulate an enhancer of TCF21 expression at the 6q23.2 coronary heart disease locus.

Authors:  Clint L Miller; D Ryan Anderson; Ramendra K Kundu; Azad Raiesdana; Sylvia T Nürnberg; Roxanne Diaz; Karen Cheng; Nicholas J Leeper; Chung-Hsing Chen; I-Shou Chang; Eric E Schadt; Chao Agnes Hsiung; Themistocles L Assimes; Thomas Quertermous
Journal:  PLoS Genet       Date:  2013-07-18       Impact factor: 5.917

10.  Integrative analysis of 111 reference human epigenomes.

Authors:  Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi-Moussavi; Pouya Kheradpour; Zhizhuo Zhang; Jianrong Wang; Michael J Ziller; Viren Amin; John W Whitaker; Matthew D Schultz; Lucas D Ward; Abhishek Sarkar; Gerald Quon; Richard S Sandstrom; Matthew L Eaton; Yi-Chieh Wu; Andreas R Pfenning; Xinchen Wang; Melina Claussnitzer; Yaping Liu; Cristian Coarfa; R Alan Harris; Noam Shoresh; Charles B Epstein; Elizabeta Gjoneska; Danny Leung; Wei Xie; R David Hawkins; Ryan Lister; Chibo Hong; Philippe Gascard; Andrew J Mungall; Richard Moore; Eric Chuah; Angela Tam; Theresa K Canfield; R Scott Hansen; Rajinder Kaul; Peter J Sabo; Mukul S Bansal; Annaick Carles; Jesse R Dixon; Kai-How Farh; Soheil Feizi; Rosa Karlic; Ah-Ram Kim; Ashwinikumar Kulkarni; Daofeng Li; Rebecca Lowdon; GiNell Elliott; Tim R Mercer; Shane J Neph; Vitor Onuchic; Paz Polak; Nisha Rajagopal; Pradipta Ray; Richard C Sallari; Kyle T Siebenthall; Nicholas A Sinnott-Armstrong; Michael Stevens; Robert E Thurman; Jie Wu; Bo Zhang; Xin Zhou; Arthur E Beaudet; Laurie A Boyer; Philip L De Jager; Peggy J Farnham; Susan J Fisher; David Haussler; Steven J M Jones; Wei Li; Marco A Marra; Michael T McManus; Shamil Sunyaev; James A Thomson; Thea D Tlsty; Li-Huei Tsai; Wei Wang; Robert A Waterland; Michael Q Zhang; Lisa H Chadwick; Bradley E Bernstein; Joseph F Costello; Joseph R Ecker; Martin Hirst; Alexander Meissner; Aleksandar Milosavljevic; Bing Ren; John A Stamatoyannopoulos; Ting Wang; Manolis Kellis
Journal:  Nature       Date:  2015-02-19       Impact factor: 69.504

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  15 in total

Review 1.  Advances in Transcriptomics: Investigating Cardiovascular Disease at Unprecedented Resolution.

Authors:  Robert C Wirka; Milos Pjanic; Thomas Quertermous
Journal:  Circ Res       Date:  2018-04-27       Impact factor: 17.367

Review 2.  Functional Assays to Screen and Dissect Genomic Hits: Doubling Down on the National Investment in Genomic Research.

Authors:  Kiran Musunuru; Daniel Bernstein; F Sessions Cole; Mustafa K Khokha; Frank S Lee; Shin Lin; Thomas V McDonald; Ivan P Moskowitz; Thomas Quertermous; Vijay G Sankaran; David A Schwartz; Edwin K Silverman; Xiaobo Zhou; Ahmed A K Hasan; Xiao-Zhong James Luo
Journal:  Circ Genom Precis Med       Date:  2018-04

3.  Association of lipid metabolism-related gene promoter methylation with risk of coronary artery disease.

Authors:  Wei Li; Yongyi Wang; Ritai Huang; Feng Lian; Genxing Xu; Weijun Wang; Song Xue
Journal:  Mol Biol Rep       Date:  2022-08-08       Impact factor: 2.742

4.  Heritability of Mitral Regurgitation: Observations From the Framingham Heart Study and Swedish Population.

Authors:  Francesca N Delling; Xinjun Li; Shuo Li; Qiong Yang; Vanessa Xanthakis; Andreas Martinsson; Pontus Andell; Birgitta T Lehman; Ewa W Osypiuk; Plamen Stantchev; Bengt Zöller; Emelia J Benjamin; Kristina Sundquist; Ramachandran S Vasan; J Gustav Smith
Journal:  Circ Cardiovasc Genet       Date:  2017-10

5.  Association of the FRMD5 rs2929282 polymorphism and serum lipid profiles in two Chinese ethnic groups.

Authors:  Hui Gao; Rui-Xing Yin; Qing-Hui Zhang; Ling Qiu; Eksavang Khounphinith; Duo-Shun Wang; Kai-Guang Li
Journal:  Int J Clin Exp Pathol       Date:  2018-07-01

6.  Association of the SPTLC3 rs364585 polymorphism and serum lipid profiles in two Chinese ethnic groups.

Authors:  Qing-Hui Zhang; Rui-Xing Yin; Hui Gao; Feng Huang; Jin-Zhen Wu; Shang-Ling Pan; Wei-Xiong Lin; De-Zhai Yang
Journal:  Lipids Health Dis       Date:  2017-01-05       Impact factor: 3.876

7.  The role of polycarbonate monomer bisphenol-A in insulin resistance.

Authors:  Milos Pjanic
Journal:  PeerJ       Date:  2017-09-13       Impact factor: 2.984

8.  Association between rs3088440 (G > A) polymorphism at 9p21.3 locus with the occurrence and severity of coronary artery disease in an Iranian population.

Authors:  Mitra Pourgholi; Omid Abazari; Leyla Pourgholi; Maryam Ghasemi-Kasman; Mohammadali Boroumand
Journal:  Mol Biol Rep       Date:  2021-07-27       Impact factor: 2.316

9.  Coordination of endothelial cell positioning and fate specification by the epicardium.

Authors:  Pearl Quijada; Michael A Trembley; Adwiteeya Misra; Jacquelyn A Myers; Cameron D Baker; Marta Pérez-Hernández; Jason R Myers; Ronald A Dirkx; Ethan David Cohen; Mario Delmar; John M Ashton; Eric M Small
Journal:  Nat Commun       Date:  2021-07-06       Impact factor: 14.919

10.  Design and rationale for examining neuroimaging genetics in ischemic stroke: The MRI-GENIE study.

Authors:  Anne-Katrin Giese; Markus D Schirmer; Kathleen L Donahue; Lisa Cloonan; Robert Irie; Stefan Winzeck; Mark J R J Bouts; Elissa C McIntosh; Steven J Mocking; Adrian V Dalca; Ramesh Sridharan; Huichun Xu; Petrea Frid; Eva Giralt-Steinhauer; Lukas Holmegaard; Jaume Roquer; Johan Wasselius; John W Cole; Patrick F McArdle; Joseph P Broderick; Jordi Jimenez-Conde; Christina Jern; Brett M Kissela; Dawn O Kleindorfer; Robin Lemmens; Arne Lindgren; James F Meschia; Tatjana Rundek; Ralph L Sacco; Reinhold Schmidt; Pankaj Sharma; Agnieszka Slowik; Vincent Thijs; Daniel Woo; Bradford B Worrall; Steven J Kittner; Braxton D Mitchell; Jonathan Rosand; Polina Golland; Ona Wu; Natalia S Rost
Journal:  Neurol Genet       Date:  2017-08-24
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