Literature DB >> 27583643

Rapid separation of Arabidopsis male gametophyte developmental stages using a Percoll gradient.

Nikoleta Dupl'áková1, Petre I Dobrev2, David Reňák1, David Honys1.   

Abstract

Research investigating the dynamics of male gametophyte (MG) development has proven to be challenging for the plant science community. Here we describe our protocol for separating Arabidopsis MG developmental stages, which is based on the centrifugation of pollen through a discontinuous Percoll concentration gradient. This Percoll gradient can be formed using a pipette, and it does not require a gradient maker. The purity of the isolated developing spores is as high as 70%, and in most separations it is well above 80%. Using this protocol, we can separate four different stages of pollen development-uninucleate microspore (UNM), bicellular pollen (BCP), tricellular immature pollen (TCP) and mature pollen grain (MPG). The duration of the separation procedure, excluding the cutting of flower inflorescences, is 6 h. This is reduced to 4 h when using a vacuum cleaning method to remove the MPGs before the Percoll density separation.

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Year:  2016        PMID: 27583643     DOI: 10.1038/nprot.2016.107

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  22 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-25       Impact factor: 11.205

2.  Comparative analysis of the Arabidopsis pollen transcriptome.

Authors:  David Honys; David Twell
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

3.  Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome.

Authors:  Jörg D Becker; Leonor C Boavida; Jorge Carneiro; Matthias Haury; José A Feijó
Journal:  Plant Physiol       Date:  2003-09-18       Impact factor: 8.340

4.  A compendium of methods useful for characterizing Arabidopsis pollen mutants and gametophytically-expressed genes.

Authors:  Sheila A Johnson-Brousseau; Sheila McCormick
Journal:  Plant J       Date:  2004-09       Impact factor: 6.417

Review 5.  Transcriptome analysis using next-generation sequencing.

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Journal:  Curr Opin Biotechnol       Date:  2012-09-25       Impact factor: 9.740

6.  Early flower development in Arabidopsis.

Authors:  D R Smyth; J L Bowman; E M Meyerowitz
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Journal:  Planta       Date:  2002-03-13       Impact factor: 4.116

8.  Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.

Authors:  Yi Wang; Wen-Zheng Zhang; Lian-Fen Song; Jun-Jie Zou; Zhen Su; Wei-Hua Wu
Journal:  Plant Physiol       Date:  2008-09-05       Impact factor: 8.340

9.  Transcriptome analysis of haploid male gametophyte development in Arabidopsis.

Authors:  David Honys; David Twell
Journal:  Genome Biol       Date:  2004-10-27       Impact factor: 13.583

10.  MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana.

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Journal:  BMC Genomics       Date:  2009-12-30       Impact factor: 3.969

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  10 in total

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2.  Transcriptomics of Arabidopsis sperm cells at single-cell resolution.

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3.  Nodulin Intrinsic Protein 7;1 Is a Tapetal Boric Acid Channel Involved in Pollen Cell Wall Formation.

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Journal:  Plant Physiol       Date:  2018-09-28       Impact factor: 8.340

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Journal:  Nat Protoc       Date:  2017-08-31       Impact factor: 13.491

5.  An armadillo-domain protein participates in a telomerase interaction network.

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6.  MeioCapture: an efficient method for staging and isolation of meiocytes in the prophase I sub-stages of meiosis in wheat.

Authors:  Arun S K Shunmugam; Venkatesh Bollina; Stefanie Dukowic-Schulze; Pankaj K Bhowmik; Chris Ambrose; James D Higgins; Curtis Pozniak; Andrew G Sharpe; Kevin Rozwadowski; Sateesh Kagale
Journal:  BMC Plant Biol       Date:  2018-11-21       Impact factor: 4.215

7.  The effect of isolation methods of tomato pollen on the results of metabolic profiling.

Authors:  Marine J Paupière; Yury M Tikunov; Nurit Firon; Ric C H de Vos; Chris Maliepaard; Richard G F Visser; Arnaud G Bovy
Journal:  Metabolomics       Date:  2019-01-08       Impact factor: 4.290

8.  Elimination of Viroids from Tobacco Pollen Involves a Decrease in Propagation Rate and an Increase of the Degradation Processes.

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Journal:  Int J Mol Sci       Date:  2020-04-24       Impact factor: 5.923

9.  The miRNome function transitions from regulating developmental genes to transposable elements during pollen maturation.

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Journal:  Plant Cell       Date:  2022-02-03       Impact factor: 11.277

10.  Quantitative methods in microscopy to assess pollen viability in different plant taxa.

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  10 in total

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