Literature DB >> 27577784

Real-time image-content-based beamline control for smart 4D X-ray imaging.

Matthias Vogelgesang1, Tomas Farago2, Thilo F Morgeneyer3, Lukas Helfen2, Tomy Dos Santos Rolo4, Anton Myagotin5, Tilo Baumbach2.   

Abstract

Real-time processing of X-ray image data acquired at synchrotron radiation facilities allows for smart high-speed experiments. This includes workflows covering parameterized and image-based feedback-driven control up to the final storage of raw and processed data. Nevertheless, there is presently no system that supports an efficient construction of such experiment workflows in a scalable way. Thus, here an architecture based on a high-level control system that manages low-level data acquisition, data processing and device changes is described. This system is suitable for routine as well as prototypical experiments, and provides specialized building blocks to conduct four-dimensional in situ, in vivo and operando tomography and laminography.

Keywords:  control; laminography; tomography

Year:  2016        PMID: 27577784     DOI: 10.1107/S1600577516010195

Source DB:  PubMed          Journal:  J Synchrotron Radiat        ISSN: 0909-0495            Impact factor:   2.616


  8 in total

1.  Drought-Induced Xylem Embolism Limits the Recovery of Leaf Gas Exchange in Scots Pine.

Authors:  Romy Rehschuh; Angelica Cecilia; Marcus Zuber; Tomáš Faragó; Tilo Baumbach; Henrik Hartmann; Steven Jansen; Stefan Mayr; Nadine Ruehr
Journal:  Plant Physiol       Date:  2020-08-20       Impact factor: 8.340

2.  Automatic processing of multimodal tomography datasets.

Authors:  Aaron D Parsons; Stephen W T Price; Nicola Wadeson; Mark Basham; Andrew M Beale; Alun W Ashton; J Frederick W Mosselmans; Paul D Quinn
Journal:  J Synchrotron Radiat       Date:  2017-01-01       Impact factor: 2.616

3.  Towards on-the-fly data post-processing for real-time tomographic imaging at TOMCAT.

Authors:  Federica Marone; Alain Studer; Heiner Billich; Leonardo Sala; Marco Stampanoni
Journal:  Adv Struct Chem Imaging       Date:  2017-01-03

4.  Parasitoid biology preserved in mineralized fossils.

Authors:  Thomas van de Kamp; Achim H Schwermann; Tomy Dos Santos Rolo; Philipp D Lösel; Thomas Engler; Walter Etter; Tomáš Faragó; Jörg Göttlicher; Vincent Heuveline; Andreas Kopmann; Bastian Mähler; Thomas Mörs; Janes Odar; Jes Rust; Nicholas Tan Jerome; Matthias Vogelgesang; Tilo Baumbach; Lars Krogmann
Journal:  Nat Commun       Date:  2018-08-28       Impact factor: 14.919

5.  Evolution of flexible biting in hyperdiverse parasitoid wasps.

Authors:  Thomas van de Kamp; István Mikó; Arnold H Staniczek; Benjamin Eggs; Daria Bajerlein; Tomáš Faragó; Lea Hagelstein; Elias Hamann; Rebecca Spiecker; Tilo Baumbach; Petr Janšta; Lars Krogmann
Journal:  Proc Biol Sci       Date:  2022-01-26       Impact factor: 5.349

6.  Tofu: a fast, versatile and user-friendly image processing toolkit for computed tomography.

Authors:  Tomáš Faragó; Sergey Gasilov; Iain Emslie; Marcus Zuber; Lukas Helfen; Matthias Vogelgesang; Tilo Baumbach
Journal:  J Synchrotron Radiat       Date:  2022-04-04       Impact factor: 2.557

7.  Have female twisted-wing parasites (Insecta: Strepsiptera) evolved tolerance traits as response to traumatic penetration?

Authors:  Kenny Jandausch; Jan Michels; Alexander Kovalev; Stanislav N Gorb; Thomas van de Kamp; Rolf Georg Beutel; Oliver Niehuis; Hans Pohl
Journal:  PeerJ       Date:  2022-08-16       Impact factor: 3.061

8.  Introducing Biomedisa as an open-source online platform for biomedical image segmentation.

Authors:  Philipp D Lösel; Thomas van de Kamp; Alejandra Jayme; Alexey Ershov; Tomáš Faragó; Olaf Pichler; Nicholas Tan Jerome; Narendar Aadepu; Sabine Bremer; Suren A Chilingaryan; Michael Heethoff; Andreas Kopmann; Janes Odar; Sebastian Schmelzle; Marcus Zuber; Joachim Wittbrodt; Tilo Baumbach; Vincent Heuveline
Journal:  Nat Commun       Date:  2020-11-04       Impact factor: 14.919

  8 in total

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