Literature DB >> 27575428

2D visualization captures the local heterogeneity of oxidative metabolism across soils from diverse land-use.

Simonetta Rubol1, Tanushree Dutta2, Duccio Rocchini3.   

Abstract

Fine-scale processes in soils affect large-scale phenomena by controlling mixing and reaction rates, yet technological constraints have hampered the collection of micro-scale kinetic data. As a result, limited information is available on the magnitude of fine-scale biogeochemical rates and their temporal and spatial pattern in response to environmental perturbations. In this work we investigate the spatio-temporal dynamics in oxidative microbial activity and the development of anoxic micro zones (i.e., anoxic hot-spots) at the microscopic level (μm - cm). These analyses rely on novel non-invasive & non-destructive optodes, which are able to capture real-time imaging of oxygen concentrations over time at an interval of twenty seconds. Results showed that labile carbon addition resulted in maximum rates of local metabolic activity within a few minutes (5 to 15) and led to the subsequent formation of anoxic hot-spots. Different areas within a given soil sample presented up to one order of magnitude variation in metabolic rate values. As a result, oxic and anoxic micro-zones coexisted closely. The relationship between oxygen concentrations and heterogeneity of oxidative metabolism resulted in an initial increase in metabolic heterogeneity over time followed by a decrease when anoxic conditions dominated. A similar link was found by comparing metabolic activity and its heterogeneity across a range of soil types. These results demonstrate that the microbial activity and hot-spot development can be monitored by using a non-invasive quantitative imaging system that allows real-time monitoring of spatial oxygen distribution. We conclude that local dynamics of heterogeneity in space and time at the fine-scale present the same functional behavior encountered in most ecosystems at the landscape-scale.
Copyright © 2016. Published by Elsevier B.V.

Entities:  

Keywords:  Interspersion; Labile substrate addition; Micro-habitats; Microbial activity; Planar optode; Real-time oxygen imaging

Mesh:

Substances:

Year:  2016        PMID: 27575428     DOI: 10.1016/j.scitotenv.2016.06.252

Source DB:  PubMed          Journal:  Sci Total Environ        ISSN: 0048-9697            Impact factor:   7.963


  4 in total

Review 1.  Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.

Authors:  Philippe C Baveye; Wilfred Otten; Alexandra Kravchenko; María Balseiro-Romero; Éléonore Beckers; Maha Chalhoub; Christophe Darnault; Thilo Eickhorst; Patricia Garnier; Simona Hapca; Serkan Kiranyaz; Olivier Monga; Carsten W Mueller; Naoise Nunan; Valérie Pot; Steffen Schlüter; Hannes Schmidt; Hans-Jörg Vogel
Journal:  Front Microbiol       Date:  2018-08-27       Impact factor: 5.640

2.  High Resolution Assessment of Spatio-Temporal Changes in O2 Concentration in Root-Pathogen Interaction.

Authors:  Mirco Rodeghiero; Simonetta Rubol; Alberto Bellin; Elena Turco; Giulia Molinatto; Damiano Gianelle; Ilaria Pertot
Journal:  Front Microbiol       Date:  2018-07-05       Impact factor: 5.640

3.  Microscale pH variations during drying of soils and desert biocrusts affect HONO and NH3 emissions.

Authors:  Minsu Kim; Dani Or
Journal:  Nat Commun       Date:  2019-09-02       Impact factor: 14.919

4.  Implication of O2 dynamics for both N2O and CH4 emissions from soil during biological soil disinfestation.

Authors:  Chen Wang; Xuehong Ma; Gang Wang; Guitong Li; Kun Zhu
Journal:  Sci Rep       Date:  2021-03-23       Impact factor: 4.379

  4 in total

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